RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 SSBP3Q9BWW4 388 aaPredicted RBP7.71□□□□□ -1.18
HDDC3-204ENST00000559834 C1QTNF5Q9BXJ0 243 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 GID8Q9NWU2 228 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 DCAF16Q9NXF7 216 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 MIOXQ9UGB7 285 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 MGAM2Q2M2H8 2515 aa7.71□□□□□ -1.18
HDDC3-204ENST00000559834 TRAV27A0A087WT01 109 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 A0A1B0GUS0 222 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 LRRC30A6NM36 301 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 BBIP1A8MTZ0 92 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 F5H0A9 414 aaPredicted RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 PIP5K1CO60331 668 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 CRYBA1P05813 215 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 BPIFB3P59826 476 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 SEC61A1P61619 476 aaKnown RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 LSM6P62312 80 aaKnown RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 DEFA6Q01524 100 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 AQP6Q13520 282 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 MAPRE2Q15555 327 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 SLC9A3R2Q15599 337 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 ZBED5Q49AG3 693 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 LRRC23Q53EV4 343 aaPredicted RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 PDLIM3Q53GG5 364 aaPredicted RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 C1orf94Q6P1W5 598 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 LEG1Q6P5S2 330 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF730Q6ZMV8 503 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 C9orf139Q6ZV77 190 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 VASH1Q7L8A9 365 aaPredicted RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 NRMQ8IXM6 262 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 MICU2Q8IYU8 434 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 C1orf87Q8N0U7 546 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 PARP8Q8N3A8 854 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 OR8G5Q8NG78 346 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 RAB40AQ8WXH6 277 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 ZDHHC16Q969W1 377 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 UPRTQ96BW1 309 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 RASD2Q96D21 266 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 C1orf147Q96MC9 270 aaPredicted RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF48Q96MX3 618 aaPredicted RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF582Q96NG8 517 aaPredicted RBP7.7□□□□□ -1.18
HDDC3-204ENST00000559834 SIGLEC11Q96RL6 698 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 TMEM165Q9HC07 324 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 GCM1Q9NP62 436 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 EMC7Q9NPA0 242 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 A4GNTQ9UNA3 340 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 AP3M1Q9Y2T2 418 aa7.7□□□□□ -1.18
HDDC3-204ENST00000559834 TEX13CA0A0J9YWL9 993 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 KIR2DS1A0A191URI9 304 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 ELOVL7A1L3X0 281 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 PRSS37A4D1T9 235 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 OR6C6A6NF89 314 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 CEACAM18A8MTB9 384 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 FAM220BPB1ANY3 271 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 MRASO14807 208 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 EDF1O60869 148 aaKnown RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 KHDRBS3O75525 346 aaKnown RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 FSTL3O95633 263 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 GPANK1O95872 356 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 IFNW1P05000 195 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 SCG5P05408 212 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 CD14P08571 375 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 RPS2P15880 293 aaKnown RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 YAP1P46937 504 aaKnown RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 MMP16P51512 607 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 ZNF362Q5T0B9 420 aaPredicted RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 FBXW12Q6X9E4 464 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 KLBQ86Z14 1044 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 OFCC1Q8IZS5 231 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 OR5AS1Q8N127 324 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 FAM156AQ8NDB6 213 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 OR2T12Q8NG77 320 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 OR8B3Q8NGG8 313 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 OR1F12Q8NHA8 337 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 ACOT11Q8WXI4 607 aaPredicted RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 APOBEC3DQ96AK3 386 aaPredicted RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 TMIGD2Q96BF3 282 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 NEIL1Q96FI4 390 aaPredicted RBP7.69□□□□□ -1.18
HDDC3-204ENST00000559834 OR8B2Q96RD0 313 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 POFUT1Q9H488 388 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 BEX1Q9HBH7 125 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 RHCGQ9UBD6 479 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 ATPIF1Q9UII2 106 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 MMP24Q9Y5R2 645 aa7.69□□□□□ -1.18
HDDC3-204ENST00000559834 IGHV3OR16-10A0A075B7F0 116 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 IGHV2-70DA0A0C4DH43 119 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 LOC100653049A0A140TA62 436 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 HMGB1P1B2RPK0 211 aaPredicted RBP7.68□□□□□ -1.18
HDDC3-204ENST00000559834 H7C1C5 153 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 FXYD1O00168 92 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 SLC16A7O60669 478 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 KRT34O76011 436 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 PLATP00750 562 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 KNG1P01042 644 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 IGHV4-38-2P0DP08 117 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 IRF2P14316 349 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 SELEP16581 610 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 LCN6P62502 163 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 PAX2Q02962 417 aa7.68□□□□□ -1.18
HDDC3-204ENST00000559834 FHL1Q13642 323 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms