RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TMEM129A0AVI4 362 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 MASP2O00187 686 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 AGPAT2O15120 278 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 DOK2O60496 412 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 IRF2P14316 349 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 CPEP16870 476 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 GABRB1P18505 474 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 FABP5Q01469 135 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 RNASE10Q5GAN6 216 aaKnown RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 LYPD8Q6UX82 237 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 PRSS45Q7RTY3 260 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF687Q8N1G0 1237 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 OR5L1Q8NGL2 311 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 INTS12Q96CB8 462 aaKnown RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 KTI12Q96EK9 354 aaPredicted RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 GIMAP5Q96F15 307 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 HHLA2Q9UM44 414 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 HS3ST3B1Q9Y662 390 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ZFC3H1O60293 1989 aaKnown RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ARID1AO14497 2285 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 A0A087WUJ7 227 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF814B7Z6K7 855 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 C4orf51C9J302 202 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 WRBO00258 174 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 IFNA21P01568 189 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 CCL3P10147 92 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 HIST1H1CP16403 213 aaKnown RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 AKR1C4P17516 323 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 CLDN12P56749 244 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ACTBP60709 375 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ACTG1P63261 375 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 MYBPHQ13203 477 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ARTNQ5T4W7 220 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 TMEM244Q5VVB8 128 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 C9orf40Q8IXQ3 194 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 GHSRQ92847 366 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 DYNLRB1Q9NP97 96 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 TXNL1O43396 289 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 RAB3DO95716 219 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 CD226Q15762 336 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 NKPD1Q17RQ9 610 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 HYAL4Q2M3T9 481 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 GCNT2Q8N0V5 402 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 FAM26EQ8N5C1 309 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 C12orf45Q8N5I9 185 aaPredicted RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ABHD4Q8TB40 342 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 C3orf49Q96BT1 292 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 BORCS8Q96FH0 119 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 OXGR1Q96P68 337 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 C20orf85Q9H1P6 137 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 DNAJB12Q9NXW2 375 aaKnown RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF223Q9UK11 482 aaPredicted RBP9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 CHD5Q8TDI0 1954 aa9.61□□□□□ -0.87
CARMIL3-202ENST00000559694 H3BUI4 141 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SCGNO76038 276 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC2A10O95528 541 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ITGB2P05107 769 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SFTPBP07988 381 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 CNR1P21554 472 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 CBX5P45973 191 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 DIO1P49895 249 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MAP2K6P52564 334 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MRPS10P82664 201 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MFAP5Q13361 173 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MEP1BQ16820 701 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 OTPQ5XKR4 325 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 PAQR8Q8TEZ7 354 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SCGB3A2Q96PL1 93 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 PFDN5Q99471 154 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 EIF5A2Q9GZV4 153 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 FOXJ2Q9P0K8 574 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MYEF2Q9P2K5 600 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 A4GNTQ9UNA3 340 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 V9GY05 133 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 PCNX2A6NKB5 2137 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 A0A096LPE4 126 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 A0A1W2PPZ6 126 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ANKRD30BLA7E2S9 258 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 OR2T7P0C7T2 308 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 UBBP0CG47 229 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 UBCP0CG48 685 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 THBS2P35442 1172 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ID4P47928 161 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC43A2Q8N370 569 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 OR2T27Q8NH04 317 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 LGALS14Q8TCE9 139 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 STK35Q8TDR2 534 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 PIGCQ92535 297 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 URM1Q9BTM9 101 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MMP25Q9NPA2 562 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 EXO1Q9UQ84 846 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ICE1Q9Y2F5 2266 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 TPPPO94811 219 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC2A1P11166 492 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 CD59P13987 128 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 GALNSP34059 522 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 UCNP55089 124 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SSX1Q16384 188 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 OR9K2Q8NGE7 335 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms