RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PLEK2Q9NYT0 353 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 LHFPL6Q9Y693 200 aa10.87□□□□□ -0.67
TPM1-209ENST00000558072 INTS1Q8N201 2190 aaKnown RBP10.87□□□□□ -0.67
TPM1-209ENST00000558072 OR5H1A6NKK0 313 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 APOL3O95236 402 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 LIMS3P0CW19 117 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 LIMS4P0CW20 117 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 CD79AP11912 226 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 ATP6V1B1P15313 513 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 CD53P19397 219 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 TGM4P49221 684 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 ETV1P50549 477 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 TPTEP56180 551 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 RAB1AP62820 205 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 ADORA2A-AS1P86434 159 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 ZNF85Q03923 595 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 MED22Q15528 200 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 MEP1BQ16820 701 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 UBE2UQ5VVX9 321 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 SKA3Q8IX90 412 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 C1orf174Q8IYL3 243 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 YIPF7Q8N8F6 280 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 ST7LQ8TDW4 575 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 THRSPQ92748 146 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 RNASE6Q93091 150 aaKnown RBP10.86□□□□□ -0.67
TPM1-209ENST00000558072 ZNF837Q96EG3 531 aaPredicted RBP10.86□□□□□ -0.67
TPM1-209ENST00000558072 CCDC120Q96HB5 630 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 TBX5Q99593 518 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 ATF6BQ99941 703 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 SH3GL3Q99963 347 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 SLC17A5Q9NRA2 495 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 CENPMQ9NSP4 180 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 DDX28Q9NUL7 540 aaKnown RBP10.86□□□□□ -0.67
TPM1-209ENST00000558072 NDRG3Q9UGV2 375 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 CFAP46Q8IYW2 2715 aa10.86□□□□□ -0.67
TPM1-209ENST00000558072 SMG1Q96Q15 3661 aaKnown RBP10.86□□□□□ -0.67
TPM1-209ENST00000558072 J3QLW9 94 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 J3QW42 95 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 DOK2O60496 412 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 RAD51DO75771 328 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 LYZL6O75951 148 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 CD1AP06126 327 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 CBR1P16152 277 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 ZNF19P17023 458 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 ZNF32P17041 273 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 PSMA1P25786 263 aaKnown RBP10.85□□□□□ -0.67
TPM1-209ENST00000558072 RGS6P49758 472 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 CDH15P55291 814 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 SORDQ00796 357 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 MLLT11Q13015 90 aaPredicted RBP10.85□□□□□ -0.67
TPM1-209ENST00000558072 TRAM1Q15629 374 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 C9orf135Q5VTT2 229 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 RPL22L1Q6P5R6 122 aaKnown RBP10.85□□□□□ -0.67
TPM1-209ENST00000558072 ZNF474Q6S9Z5 364 aaPredicted RBP10.85□□□□□ -0.67
TPM1-209ENST00000558072 STAC2Q6ZMT1 411 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
TPM1-209ENST00000558072 LIX1LQ8IVB5 337 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 LINC00346Q8IVM7 164 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 CCDC54Q8NEL0 328 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 OR1F12Q8NHA8 337 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 FBXO17Q96EF6 278 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 C4orf36Q96KX1 117 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 COG8Q96MW5 612 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 KCNJ15Q99712 375 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 OR2H1Q9GZK4 316 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 SLC24A3Q9HC58 644 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 BATF3Q9NR55 127 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 NDUFA13Q9P0J0 144 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 GNG8Q9UK08 70 aa10.85□□□□□ -0.67
TPM1-209ENST00000558072 A0A096LPE4 126 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 A0A1W2PPZ6 126 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 GPANK1O95872 356 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 SERPINA5P05154 406 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 SCG5P05408 212 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 HTR1AP08908 422 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 MMP7P09237 267 aaPredicted RBP10.84□□□□□ -0.67
TPM1-209ENST00000558072 PLA2G2AP14555 144 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 PCMT1P22061 227 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 TUBG1P23258 451 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 APLNRP35414 380 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 OPRL1P41146 370 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 MMP16P51512 607 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 CCR9P51686 369 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 PSG4Q00888 419 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 TIGD6Q17RP2 521 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 TIMM50Q3ZCQ8 353 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 ZNF684Q5T5D7 378 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 SYT6Q5T7P8 510 aaPredicted RBP10.84□□□□□ -0.67
TPM1-209ENST00000558072 FDX2Q6P4F2 183 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 LYPD4Q6UWN0 246 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 DRAM2Q6UX65 266 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 RELL2Q8NC24 303 aaPredicted RBP10.84□□□□□ -0.67
TPM1-209ENST00000558072 SPRYD4Q8WW59 207 aaPredicted RBP10.84□□□□□ -0.67
TPM1-209ENST00000558072 UFD1Q92890 307 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 MGLLQ99685 303 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 RHNO1Q9BSD3 238 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 ELOVL3Q9HB03 270 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 TUBG2Q9NRH3 451 aa10.84□□□□□ -0.67
TPM1-209ENST00000558072 ZNF391Q9UJN7 358 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms