RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CDK5R1Q15078 307 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 DMKNQ6E0U4 476 aaPredicted RBP20.83■□□□□ 0.92
SIX4-203ENST00000556952 ZNF813Q6ZN06 617 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 SYT9Q86SS6 491 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 LRRC18Q8N456 261 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 SMIM19Q96E16 107 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 GRIP1Q9Y3R0 1128 aa20.83■□□□□ 0.92
SIX4-203ENST00000556952 PNMA8CA0A1B0GUJ8 204 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 H3BMQ9 156 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 AIREO43918 545 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 TNFSF13O75888 250 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 WNT11O96014 354 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 CD1AP06126 327 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 HIST1H3AP68431 136 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 ARF1P84077 181 aaKnown RBP20.82■□□□□ 0.92
SIX4-203ENST00000556952 HIST2H3PS2Q5TEC6 136 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 HIST2H3AQ71DI3 136 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 RPS4Y2Q8TD47 263 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 C12orf43Q96C57 262 aaKnown RBP20.82■□□□□ 0.92
SIX4-203ENST00000556952 KCNN2Q9H2S1 579 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 PLSCR4Q9NRQ2 329 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 STUB1Q9UNE7 303 aa20.82■□□□□ 0.92
SIX4-203ENST00000556952 SF3B6Q9Y3B4 125 aaKnown RBP20.82■□□□□ 0.92
SIX4-203ENST00000556952 SIRT4Q9Y6E7 314 aaPredicted RBP20.82■□□□□ 0.92
SIX4-203ENST00000556952 NCOA6Q14686 2063 aaPredicted RBP20.82■□□□□ 0.92
SIX4-203ENST00000556952 TOXO94900 526 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 H2BFMP0C1H6 154 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 CEACAM8P31997 349 aaPredicted RBP20.81■□□□□ 0.92
SIX4-203ENST00000556952 DCTDP32321 178 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 PCBD1P61457 104 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 SCRN3Q0VDG4 424 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 FOXF2Q12947 444 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 CTF1Q16619 201 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 OR7E24Q6IFN5 339 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 VWA1Q6PCB0 445 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 KLHL24Q6TFL4 600 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 GDPGP1Q6ZNW5 385 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 SPATC1Q76KD6 591 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 OR10S1Q8NGN2 331 aa20.81■□□□□ 0.92
SIX4-203ENST00000556952 RER1O15258 196 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 RPP14O95059 124 aaKnown RBP20.8■□□□□ 0.92
SIX4-203ENST00000556952 PSMB10P40306 273 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 SRSF1Q07955 248 aaKnown RBP eCLIP20.8■□□□□ 0.92
SIX4-203ENST00000556952 TRAM1Q15629 374 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 ZNF544Q6NX49 715 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 FDX2Q6P4F2 183 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 ARL9Q6T311 187 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 Q6ZT83 130 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 SLC16A14Q7RTX9 510 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.8■□□□□ 0.92
SIX4-203ENST00000556952 RNF166Q96A37 237 aaPredicted RBP20.8■□□□□ 0.92
SIX4-203ENST00000556952 FBXO17Q96EF6 278 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 SH3GL3Q99963 347 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 NIPAL2Q9H841 368 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 PNRC2Q9NPJ4 139 aaKnown RBP20.8■□□□□ 0.92
SIX4-203ENST00000556952 CENPMQ9NSP4 180 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 DDX28Q9NUL7 540 aaKnown RBP20.8■□□□□ 0.92
SIX4-203ENST00000556952 PROCRQ9UNN8 238 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 TRBV2A0A0J9YWF9 115 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 GLI4P10075 376 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 RPRMLQ8N4K4 120 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 PGLYRP3Q96LB9 341 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 COQ7Q99807 217 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 SFXN3Q9BWM7 321 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 OR51E2Q9H255 320 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 SH3BGRL2Q9UJC5 107 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 TINAGQ9UJW2 476 aa20.8■□□□□ 0.92
SIX4-203ENST00000556952 SLC22A1O15245 554 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 GPRIN2O60269 458 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 IL18BPO95998 194 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 ITGA5P08648 1049 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 GALP22466 123 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 GDI2P50395 445 aaKnown RBP20.79■□□□□ 0.92
SIX4-203ENST00000556952 RPS25P62851 125 aaKnown RBP20.79■□□□□ 0.92
SIX4-203ENST00000556952 GRB2P62993 217 aaKnown RBP20.79■□□□□ 0.92
SIX4-203ENST00000556952 ALKBH1Q13686 389 aaKnown RBP20.79■□□□□ 0.92
SIX4-203ENST00000556952 ANKRD16Q6P6B7 361 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 MYO7BQ6PIF6 2116 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 CD200R1LQ6Q8B3 271 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 RPL3LQ92901 407 aaKnown RBP20.79■□□□□ 0.92
SIX4-203ENST00000556952 STARD4Q96DR4 205 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 R4GMQ9 66 aa20.79■□□□□ 0.92
SIX4-203ENST00000556952 DIDO1Q9BTC0 2240 aaKnown RBP20.79■□□□□ 0.92
SIX4-203ENST00000556952 LRRK2Q5S007 2527 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 CGAP01215 116 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 HLA-DPB1P04440 258 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 CD8BP10966 210 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 NR4A1P22736 598 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 CRYBB2P43320 205 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 FOXG1P55316 489 aaPredicted RBP20.78■□□□□ 0.92
SIX4-203ENST00000556952 TGFBR3Q03167 851 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 SLC3A1Q07837 685 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 ZNF829Q3KNS6 432 aaPredicted RBP20.78■□□□□ 0.92
SIX4-203ENST00000556952 SLC36A2Q495M3 483 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 C9orf135Q5VTT2 229 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 C3P1Q6ZMU1 363 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 BTLAQ7Z6A9 289 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 DPPA2Q7Z7J5 298 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 SKA3Q8IX90 412 aa20.78■□□□□ 0.92
SIX4-203ENST00000556952 NAXEQ8NCW5 288 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms