RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ATG16L2Q8NAA4 619 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 PROKR2Q8NFJ6 384 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 OR1F12Q8NHA8 337 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 DNAJC9Q8WXX5 260 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 FAM168AQ92567 244 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 SMR3AQ99954 134 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 HDHD2Q9H0R4 259 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 MS4A5Q9H3V2 200 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 MRPL22Q9NWU5 206 aaKnown RBP19.6■□□□□ 0.73
TDP1-216ENST00000556867 KCNG2Q9UJ96 466 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 AP4S1Q9Y587 144 aa19.6■□□□□ 0.73
TDP1-216ENST00000556867 H3BSA7 217 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 EBAG9O00559 213 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 ABHD16AO95870 558 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 CLPTM1O96005 669 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 HLA-DQA2P01906 255 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 ZNF3P17036 446 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 GGT2P36268 569 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 PPP1CBP62140 327 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 MAD2L1BPQ15013 274 aaPredicted RBP19.59■□□□□ 0.73
TDP1-216ENST00000556867 SLC18B1Q6NT16 456 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 SLC27A4Q6P1M0 643 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 OR9Q1Q8NGQ5 310 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 OR5K1Q8NHB7 308 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 ABHD4Q8TB40 342 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 C10orf105Q8TEF2 133 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 MARS2Q96GW9 593 aaKnown RBP19.59■□□□□ 0.73
TDP1-216ENST00000556867 TBCCD1Q9NVR7 557 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 SLCO1C1Q9NYB5 712 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 CYB5R1Q9UHQ9 305 aa19.59■□□□□ 0.73
TDP1-216ENST00000556867 NGFP01138 241 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 FCGR1AP12314 374 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 FASP25445 335 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 PDLIM4P50479 330 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 NKPD1Q17RQ9 610 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 ZNF718Q3SXZ3 478 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 ELFN2Q5R3F8 820 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 FAHD1Q6P587 224 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 CORO6Q6QEF8 472 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 SLC25A40Q8TBP6 338 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 ZNRF4Q8WWF5 429 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 COQ7Q99807 217 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 TPK1Q9H3S4 243 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 TAAR3PQ9P1P4 343 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 KIF17Q9P2E2 1029 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 GPR160Q9UJ42 338 aa19.58■□□□□ 0.72
TDP1-216ENST00000556867 A0A096LNT2 108 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 IGHV3-13P01766 116 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 SLC25A16P16260 332 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 SPI1P17947 270 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 POU1F1P28069 291 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 GINS1Q14691 196 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 SPATA46Q5T0L3 261 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 MBNL2Q5VZF2 373 aaKnown RBP19.57■□□□□ 0.72
TDP1-216ENST00000556867 CFAP77Q6ZQR2 320 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 HIPK1Q86Z02 1210 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 LINC00346Q8IVM7 164 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 KLF14Q8TD94 323 aaPredicted RBP19.57■□□□□ 0.72
TDP1-216ENST00000556867 SLC7A6Q92536 515 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 DCLRE1CQ96SD1 692 aaKnown RBP19.57■□□□□ 0.72
TDP1-216ENST00000556867 CDADC1Q9BWV3 514 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 OR2J1Q9GZK6 312 aa19.57■□□□□ 0.72
TDP1-216ENST00000556867 SETD2Q9BYW2 2564 aaPredicted RBP19.56■□□□□ 0.72
TDP1-216ENST00000556867 J3QW42 95 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 NDUFS8O00217 210 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 ZNF823P16415 610 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 TUBG1P23258 451 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 GCH1P30793 250 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 MPV17P39210 176 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 CDK5Q00535 292 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 MOGQ16653 247 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 ACSM5Q6NUN0 579 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 CLEC9AQ6UXN8 241 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 PARP8Q8N3A8 854 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 OR51L1Q8NGJ5 315 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 OR2AJ1Q8NGZ0 328 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 IPCEF1Q8WWN9 437 aaPredicted RBP19.56■□□□□ 0.72
TDP1-216ENST00000556867 SLC25A19Q9HC21 320 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 TUBG2Q9NRH3 451 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 PAPOLBQ9NRJ5 636 aaKnown RBP19.56■□□□□ 0.72
TDP1-216ENST00000556867 GRIP1Q9Y3R0 1128 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 COMMD3-BMI1R4GMX3 469 aa19.56■□□□□ 0.72
TDP1-216ENST00000556867 NSD1Q96L73 2696 aaPredicted RBP19.56■□□□□ 0.72
TDP1-216ENST00000556867 ABCA1O95477 2261 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 LOC390937A0A1W2PQ73 354 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 TVP23AA6NH52 213 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 LY6G6DO95868 133 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 GYPBP06028 91 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 HEXAP06865 529 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 DBHP09172 617 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 CLUP10909 449 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 NAT2P11245 290 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 DAOP14920 347 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 FMO3P31513 532 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 RGS6P49758 472 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 BLVRAP53004 296 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 ACTR3P61158 418 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 KRTAP27-1Q3LI81 207 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 LYPD4Q6UWN0 246 aa19.55■□□□□ 0.72
TDP1-216ENST00000556867 SNX33Q8WV41 574 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms