RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CDH20Q9HBT6 801 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 TAAR3PQ9P1P4 343 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 STX18Q9P2W9 335 aaKnown RBP8.47□□□□□ -1.05
SCFD1-220ENST00000556486 CACNG2Q9Y698 323 aa8.47□□□□□ -1.05
SCFD1-220ENST00000556486 PPIAL4EA0A075B759 164 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 IGHV3OR16-10A0A075B7F0 116 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 PPIAL4CA0A0B4J2A2 164 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 IGHV1-69-2A0A0G2JMI3 117 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 HTR3EA5X5Y0 456 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 CPSF4LA6NMK7 179 aaKnown RBP8.46□□□□□ -1.06
SCFD1-220ENST00000556486 PPIAL4DF5H284 164 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 H3BSA7 217 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 FSHBP01225 129 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 IGHV2-5P01817 119 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 MT-ND1P03886 318 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 MT-ND5P03915 603 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 AMY1AP04745 511 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 PPIAL4FP0DN26 164 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 RAC2P15153 192 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 GDNFP39905 211 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 GZMMP51124 257 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 DAP3P51398 398 aaKnown RBP8.46□□□□□ -1.06
SCFD1-220ENST00000556486 MMP15P51511 669 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF84P51523 738 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 UGT2B15P54855 530 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 PLP2Q04941 152 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 MELKQ14680 651 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 C19orf54Q5BKX5 351 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 ARMC4Q5T2S8 1044 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 CD300LDQ6UXZ3 194 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 NANOGNBQ7Z5D8 188 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 RBM45Q8IUH3 476 aaKnown RBP8.46□□□□□ -1.06
SCFD1-220ENST00000556486 NOXO1Q8NFA2 376 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 ASB10Q8WXI3 467 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 MUL1Q969V5 352 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 LRRC58Q96CX6 371 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 TSPAN32Q96QS1 320 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 CCT8L2Q96SF2 557 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 OR51B6Q9H340 312 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 CNTD2Q9H8S5 307 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 SIAEQ9HAT2 523 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 NTN4Q9HB63 628 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 SLC7A7Q9UM01 511 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 NDUFAF1Q9Y375 327 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 UGT2A1Q9Y4X1 527 aa8.46□□□□□ -1.06
SCFD1-220ENST00000556486 IQCMA0A1B0GVH7 501 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 A0A1W2PRG6 482 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 GMNCA6NCL1 334 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 CLDN25C9JDP6 229 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 GPANK1O95872 356 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 OPN1SWP03999 348 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 HIST1H2ABP04908 130 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 THRBP10828 461 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 NR2C1P13056 603 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 CCL2P13500 99 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 ACADSP16219 412 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 LIPAP38571 399 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 MTPNP58546 118 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 ERVS71-1P61550 626 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 RPL18Q07020 188 aaKnown RBP8.45□□□□□ -1.06
SCFD1-220ENST00000556486 SELPLGQ14242 412 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 FAM27BQ5VT28 67 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 UNQ6126/PRO20091Q6UXV3 157 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 HIST3H2AQ7L7L0 130 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 PQLC1Q8N2U9 271 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 RBM15BQ8NDT2 890 aaKnown RBP8.45□□□□□ -1.06
SCFD1-220ENST00000556486 CPEB3Q8NE35 698 aaKnown RBP8.45□□□□□ -1.06
SCFD1-220ENST00000556486 HIST1H2ACQ93077 130 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 NABP1Q96AH0 204 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 MARS2Q96GW9 593 aaKnown RBP8.45□□□□□ -1.06
SCFD1-220ENST00000556486 POM121L2Q96KW2 1035 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF347Q96SE7 839 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 NANOGQ9H9S0 305 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 SAP30LQ9HAJ7 183 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 TNFRSF19Q9NS68 423 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 UBAP1Q9NZ09 502 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 KLHL21Q9UJP4 597 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 WIPI2Q9Y4P8 454 aa8.45□□□□□ -1.06
SCFD1-220ENST00000556486 WNK1Q9H4A3 2382 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 SCO2A0A1W2PP80 73 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 BLOC1S5-TXNDC5H3BN57 136 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 ANGPT2O15123 496 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 TRMUO75648 421 aaKnown RBP8.44□□□□□ -1.06
SCFD1-220ENST00000556486 OR7A10O76100 309 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 OR5F1O95221 314 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-220ENST00000556486 LCKP06239 509 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 CD55P08174 381 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 STOMP27105 288 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 APLNRP35414 380 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 WNT5AP41221 380 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF81P51508 661 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 CLRN1P58418 232 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 RPS16P62249 146 aaKnown RBP8.44□□□□□ -1.06
SCFD1-220ENST00000556486 GLO1Q04760 184 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 SLC3A1Q07837 685 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 TAF11Q15544 211 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 VMACQ2NL98 169 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 HFEQ30201 348 aa8.44□□□□□ -1.06
SCFD1-220ENST00000556486 ARMCX4Q5H9R4 360 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms