RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 RNF113BQ8IZP6 322 aaKnown RBP11.18□□□□□ -0.62
TGFB3-204ENST00000556285 OR5AS1Q8N127 324 aa11.18□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF283Q8N7M2 679 aa11.18□□□□□ -0.62
TGFB3-204ENST00000556285 SIGLECL1Q8N7X8 197 aa11.18□□□□□ -0.62
TGFB3-204ENST00000556285 FAM46AQ96IP4 442 aaKnown RBP11.18□□□□□ -0.62
TGFB3-204ENST00000556285 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
TGFB3-204ENST00000556285 PATZ1Q9HBE1 687 aaKnown RBP11.18□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF69Q9UC07 566 aa11.18□□□□□ -0.62
TGFB3-204ENST00000556285 CGGBP1Q9UFW8 167 aaPredicted RBP11.18□□□□□ -0.62
TGFB3-204ENST00000556285 IL20RAQ9UHF4 553 aa11.18□□□□□ -0.62
TGFB3-204ENST00000556285 COA3Q9Y2R0 106 aaPredicted RBP11.18□□□□□ -0.62
TGFB3-204ENST00000556285 SOX21Q9Y651 276 aaPredicted RBP11.18□□□□□ -0.62
TGFB3-204ENST00000556285 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 PRSS37A4D1T9 235 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SOCS2O14508 198 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SLC16A7O60669 478 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 PTP4A3O75365 173 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 FOXH1O75593 365 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF205O95201 554 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 LIMS1P48059 325 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SLC6A9P48067 706 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 GSK3BP49841 420 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SLC7A2P52569 658 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 FXYD6P3P58550 94 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 GUCY1A3Q02108 690 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SCRN3Q0VDG4 424 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF154Q13106 437 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 ANKDD1AQ495B1 522 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 ZMAT1Q5H9K5 638 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 C8orf82Q6P1X6 216 aaPredicted RBP11.17□□□□□ -0.62
TGFB3-204ENST00000556285 ARL9Q6T311 187 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 PTCHD4Q6ZW05 846 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 FKBP9P1Q75LS8 142 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 LRRC28Q86X40 367 aaPredicted RBP11.17□□□□□ -0.62
TGFB3-204ENST00000556285 FAM156AQ8NDB6 213 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 NPEPL1Q8NDH3 523 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SLC7A13Q8TCU3 470 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 HAVCR1Q96D42 359 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SAMD8Q96LT4 415 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 C1orf147Q96MC9 270 aaPredicted RBP11.17□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF570Q96NI8 536 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SYT4Q9H2B2 425 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 NMNAT1Q9HAN9 279 aaPredicted RBP11.17□□□□□ -0.62
TGFB3-204ENST00000556285 PLEK2Q9NYT0 353 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 PTTG3PQ9NZH4 202 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 ASH2LQ9UBL3 628 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 PPP1R3CQ9UQK1 317 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 SIGLEC7Q9Y286 467 aa11.17□□□□□ -0.62
TGFB3-204ENST00000556285 PPIAL4EA0A075B759 164 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 PPIAL4CA0A0B4J2A2 164 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 OR6C6A6NF89 314 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 F5H0A9 414 aaPredicted RBP11.16□□□□□ -0.62
TGFB3-204ENST00000556285 PPIAL4DF5H284 164 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 H0YL77 283 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 DCTN6O00399 190 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 XKRYO14609 159 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 GSTA4O15217 222 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 RER1O15258 196 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 PPIAL4FP0DN26 164 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 COX4I1P13073 169 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF12P17014 697 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 FPR2P25090 351 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 BTG1P62324 171 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 AQP6Q13520 282 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 KRR1Q13601 381 aaKnown RBP11.16□□□□□ -0.62
TGFB3-204ENST00000556285 SEC23BQ15437 767 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 MEP1BQ16820 701 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 ZER1Q7Z7L7 766 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.16□□□□□ -0.62
TGFB3-204ENST00000556285 TREML1Q86YW5 311 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 KLHL36Q8N4N3 616 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 OR10AD1Q8NGE0 317 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 OR1F12Q8NHA8 337 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 RP9Q8TA86 221 aaKnown RBP11.16□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF420Q8TAQ5 688 aaPredicted RBP11.16□□□□□ -0.62
TGFB3-204ENST00000556285 ZNF48Q96MX3 618 aaPredicted RBP11.16□□□□□ -0.62
TGFB3-204ENST00000556285 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 OR2V2Q96R30 315 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 NUAK2Q9H093 628 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 MRGBPQ9NV56 204 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 POLR3KQ9Y2Y1 108 aaPredicted RBP11.16□□□□□ -0.62
TGFB3-204ENST00000556285 PCDHGB1Q9Y5G3 927 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 ENPP4Q9Y6X5 453 aa11.16□□□□□ -0.62
TGFB3-204ENST00000556285 PRKDCP78527 4128 aaKnown RBP11.15□□□□□ -0.62
TGFB3-204ENST00000556285 IGHV3OR16-10A0A075B7F0 116 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 TRBV4-1A0A0J9YWV2 114 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 DNAJC9-AS1A6NH13 148 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 TMEM178BH3BS89 294 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 KHDRBS3O75525 346 aaKnown RBP11.15□□□□□ -0.62
TGFB3-204ENST00000556285 DIRAS1O95057 198 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 NDUFB2O95178 105 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 TNFRSF1AP19438 455 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 TNFSF4P23510 183 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 CDKN2AP42771 156 aaKnown RBP11.15□□□□□ -0.62
TGFB3-204ENST00000556285 OMPP47874 163 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 MMP16P51512 607 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 TMEM155Q4W5P6 130 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 ARMCX4Q5H9R4 360 aa11.15□□□□□ -0.62
TGFB3-204ENST00000556285 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms