RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 C6orf10Q5SRN2 563 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 HHATQ5VTY9 493 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 DCAF12L2Q5VW00 463 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 NXNQ6DKJ4 435 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 TMEM53Q6P2H8 277 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 ZNF613Q6PF04 617 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC2A7Q6PXP3 512 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 KRT73Q86Y46 540 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 BPIFB2Q8N4F0 458 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 OR4K5Q8NGD3 323 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 NFKBIDQ8NI38 313 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 ZNF566Q969W8 418 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 C1orf147Q96MC9 270 aaPredicted RBP7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 OR52B2Q96RD2 323 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 C1orf43Q9BWL3 253 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 C1orf198Q9H425 327 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 KCNK9Q9NPC2 374 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 SELENONQ9NZV5 590 aa7.54□□□□□ -1.2
GTF2A1-204ENST00000556268 CENPBD1B2RD01 187 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 CLDN25C9JDP6 229 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 CLDN34H7C241 214 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 ERLIN1O75477 346 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 SERPINB7O75635 380 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 FARS2O95363 451 aaKnown RBP7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 IGHV1-46P01743 117 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 ASAH2BP0C7U1 165 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 KITP10721 976 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 SLC36A2Q495M3 483 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 TMEM255AQ5JRV8 349 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 KLF17Q5JT82 389 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 GCNT6Q5T4J0 391 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 EPGNQ6UW88 154 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 PRR18Q8N4B5 295 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 LRRC17Q8N6Y2 441 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 DEFB108BQ8NET1 73 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 NTN5Q8WTR8 489 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 GTF3AQ92664 365 aaKnown RBP7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 MCHR2Q969V1 340 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 NMD3Q96D46 503 aaKnown RBP7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 ELMOD3Q96FG2 381 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 TIMD4Q96H15 378 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 POM121L2Q96KW2 1035 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 ARHGDIGQ99819 225 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 ZNF426Q9BUY5 554 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 LRMDAQ9H2I8 198 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 CDH20Q9HBT6 801 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 MMP26Q9NRE1 261 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 DECR2Q9NUI1 292 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 VAPAQ9P0L0 249 aa7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 LEF1Q9UJU2 399 aaPredicted RBP7.53□□□□□ -1.2
GTF2A1-204ENST00000556268 VWFP04275 2813 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 IQCMA0A1B0GVH7 501 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 C11orf98E9PRG8 122 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 TRAPPC2LH3BP13 241 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 CHP2O43745 196 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 FOXH1O75593 365 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 OR6A2O95222 327 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 CH25HO95992 272 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 LCKP06239 509 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 CD55P08174 381 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 TSPAN19P0C672 248 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 PPIBP23284 216 aaKnown RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 LIPAP38571 399 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 WNT5AP41221 380 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 ZNF81P51508 661 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 RGS8P57771 180 aaPredicted RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 DEFA6Q01524 100 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC3A1Q07837 685 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 NPTX1Q15818 432 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 TSTQ16762 297 aaKnown RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 DUSP7Q16829 419 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 TBC1D28Q2M2D7 210 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 ZNF718Q3SXZ3 478 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 PAGE3Q5JUK9 113 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 ZNF362Q5T0B9 420 aaPredicted RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 THEM4Q5T1C6 240 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 C10orf128Q5T292 105 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 DLEU7Q6UYE1 221 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC16A14Q7RTX9 510 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 FAM90A1Q86YD7 464 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 C1orf174Q8IYL3 243 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 C10orf53Q8N6V4 93 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 SIGLECL1Q8N7X8 197 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 BOLLQ8N9W6 283 aaKnown RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 OR6T1Q8NGN1 323 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 OR1J1Q8NGS3 322 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 C22orf15Q8WYQ4 148 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 CCL17Q92583 94 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 POP5Q969H6 163 aaKnown RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 ZNF48Q96MX3 618 aaPredicted RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 ZNF607Q96SK3 696 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 MCHR1Q99705 422 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 GPA33Q99795 319 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 PAIP2Q9BPZ3 127 aaKnown RBP7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 C1QTNF5Q9BXJ0 243 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC19A3Q9BZV2 496 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 SLITRK2Q9H156 845 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 PCDHAC1Q9H158 963 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 IKZF5Q9H5V7 419 aa7.52□□□□□ -1.21
GTF2A1-204ENST00000556268 RNF121Q9H920 327 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms