RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ERFP50548 548 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 BNIP1Q12981 228 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 FLOT2Q14254 428 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 ZNF718Q3SXZ3 478 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 C6orf52Q5T4I8 152 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 TMEM179BQ7Z7N9 219 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 CYB561A3Q8NBI2 242 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 OR10G2Q8NGC3 310 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 KLF14Q8TD94 323 aaPredicted RBP17.51■□□□□ 0.39
VTI1B-205ENST00000555543 DDOQ99489 341 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 NIPSNAP1Q9BPW8 284 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 CADM1Q9BY67 442 aaKnown RBP17.51■□□□□ 0.39
VTI1B-205ENST00000555543 YAE1D1Q9NRH1 226 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 TBC1D23Q9NUY8 699 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 ARMC1Q9NVT9 282 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 SLCO1C1Q9NYB5 712 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 POMPQ9Y244 141 aa17.51■□□□□ 0.39
VTI1B-205ENST00000555543 TLX2O43763 284 aaPredicted RBP17.5■□□□□ 0.39
VTI1B-205ENST00000555543 DBHP09172 617 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 ZNF16P17020 682 aaPredicted RBP17.5■□□□□ 0.39
VTI1B-205ENST00000555543 COL8A2P25067 703 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 GCH1P30793 250 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 HIST1H3AP68431 136 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 ZNF362Q5T0B9 420 aaPredicted RBP17.5■□□□□ 0.39
VTI1B-205ENST00000555543 HIST2H3PS2Q5TEC6 136 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 MBNL2Q5VZF2 373 aaKnown RBP17.5■□□□□ 0.39
VTI1B-205ENST00000555543 CORO6Q6QEF8 472 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 HIST2H3AQ71DI3 136 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 SPATA24Q86W54 205 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 OR4Q3Q8NH05 313 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 OR1F12Q8NHA8 337 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 SNX33Q8WV41 574 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 YIPF5Q969M3 257 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 TSSK6Q9BXA6 273 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 ELOVL3Q9HB03 270 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 GPR160Q9UJ42 338 aa17.5■□□□□ 0.39
VTI1B-205ENST00000555543 TCRBV3S1A0A5B6 114 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 LRP5LA4QPB2 252 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 ZNF23P17027 643 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 PYCR1P32322 319 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 MMP15P51511 669 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 CCL8P80075 99 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 TEKQ02763 1124 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 COX10Q12887 443 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 TRIP10Q15642 601 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 TMEM154Q6P9G4 183 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 UNQ6126/PRO20091Q6UXV3 157 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 LINC00346Q8IVM7 164 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 LNX2Q8N448 690 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 SLC37A3Q8NCC5 494 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 ZNF540Q8NDQ6 660 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 ZNRF4Q8WWF5 429 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 FEVQ99581 238 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 MRPL22Q9NWU5 206 aaKnown RBP17.49■□□□□ 0.39
VTI1B-205ENST00000555543 GRIP1Q9Y3R0 1128 aa17.49■□□□□ 0.39
VTI1B-205ENST00000555543 GSC2O15499 205 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 LILRA1O75019 489 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 GSTM3P21266 225 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 ARHGDIAP52565 204 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 KRTAP21-3Q3LHN1 58 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 SLC18B1Q6NT16 456 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 CFAP77Q6ZQR2 320 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 GIPC3Q8TF64 312 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 RDH5Q92781 318 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 SOX7Q9BT81 388 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 TBCCD1Q9NVR7 557 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 ATPIF1Q9UII2 106 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 STARD10Q9Y365 291 aa17.48■□□□□ 0.39
VTI1B-205ENST00000555543 SVEP1Q4LDE5 3571 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 ZSCAN5BA6NJL1 495 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 H3BSA7 217 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 CRLF1O75462 422 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 RP2O75695 350 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 TACSTD2P09758 323 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 PSKH1P11801 424 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 IL2RGP31785 369 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 GGT2P36268 569 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 CRMP1Q14194 572 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 GK3PQ14409 553 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 ARL9Q6T311 187 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 LYPD4Q6UWN0 246 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 CD300LDQ6UXZ3 194 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 C1orf174Q8IYL3 243 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 HS3ST5Q8IZT8 346 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 GJC3Q8NFK1 279 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 OR9Q1Q8NGQ5 310 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 SLCO4A1Q96BD0 722 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 HDHD2Q9H0R4 259 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 CHODLQ9H9P2 273 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 ZNF275Q9NSD4 429 aaPredicted RBP17.47■□□□□ 0.39
VTI1B-205ENST00000555543 NKIRAS2Q9NYR9 191 aa17.47■□□□□ 0.39
VTI1B-205ENST00000555543 ARRDC5A6NEK1 342 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 A8MV72 311 aaPredicted RBP17.46■□□□□ 0.39
VTI1B-205ENST00000555543 FKBP6O75344 327 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 IGHV1-46P01743 117 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 HLA-DQA2P01906 255 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 ACHEP22303 614 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 RPS27P42677 84 aaKnown RBP17.46■□□□□ 0.39
VTI1B-205ENST00000555543 ZNF81P51508 661 aa17.46■□□□□ 0.39
VTI1B-205ENST00000555543 MRPS11P82912 194 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms