RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CXCR4P61073 352 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 ECH1Q13011 328 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 RAB35Q15286 201 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 ADAM5Q6NVV9 412 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 DCXRQ7Z4W1 244 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-219ENST00000555323 SLC30A7Q8NEW0 376 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 OR10S1Q8NGN2 331 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 OR1J2Q8NGS2 313 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 OR6N2Q8NGY6 317 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 OR2T27Q8NH04 317 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 OR1F12Q8NHA8 337 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 CNIH3Q8TBE1 160 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 IPCEF1Q8WWN9 437 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-219ENST00000555323 CNN2Q99439 309 aaKnown RBP10.99□□□□□ -0.65
SYNE2-219ENST00000555323 ABHD6Q9BV23 337 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 HDHD2Q9H0R4 259 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 PLCXD1Q9NUJ7 323 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 RPL36Q9Y3U8 105 aaKnown RBP10.99□□□□□ -0.65
SYNE2-219ENST00000555323 PCDHGB1Q9Y5G3 927 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 TMEM14AQ9Y6G1 99 aa10.99□□□□□ -0.65
SYNE2-219ENST00000555323 PKDREJQ9NTG1 2253 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 IGHV2OR16-5A0A0B4J2B6 119 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 SHISA9B4DS77 424 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 ABCD4O14678 606 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 DOK2O60496 412 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 CD3EP07766 207 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 LYNP07948 512 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 DBTP11182 482 aaKnown RBP10.98□□□□□ -0.65
SYNE2-219ENST00000555323 APEX1P27695 318 aaKnown RBP10.98□□□□□ -0.65
SYNE2-219ENST00000555323 PCSK6P29122 969 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 CALCRP30988 508 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 APLNRP35414 380 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 NAA10P41227 235 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-219ENST00000555323 HCCSP53701 268 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 CSNK2BP67870 215 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 RAB40BQ12829 278 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 TBC1D28Q2M2D7 210 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 DEGS2Q6QHC5 323 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 OR51G2Q8NGK0 314 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 LILRB1Q8NHL6 650 aaPredicted RBP10.98□□□□□ -0.65
SYNE2-219ENST00000555323 RNF133Q8WVZ7 376 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 SLAMF6Q96DU3 332 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 PIK3IP1Q96FE7 263 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 HS3ST6Q96QI5 342 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 DCLRE1CQ96SD1 692 aaKnown RBP10.98□□□□□ -0.65
SYNE2-219ENST00000555323 ATF6BQ99941 703 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 RNF115Q9Y4L5 304 aa10.98□□□□□ -0.65
SYNE2-219ENST00000555323 A0A1W2PPR1 153 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 PHYHO14832 338 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 MRPL3P09001 348 aaKnown RBP10.97□□□□□ -0.65
SYNE2-219ENST00000555323 SSTR2P30874 369 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 GDI2P50395 445 aaKnown RBP10.97□□□□□ -0.65
SYNE2-219ENST00000555323 NKX6-1P78426 367 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-219ENST00000555323 ROM1Q03395 351 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 TLE4Q04727 773 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 HGFACQ04756 655 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF91Q05481 1191 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 EGR3Q06889 387 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 EIF2B1Q14232 305 aaKnown RBP10.97□□□□□ -0.65
SYNE2-219ENST00000555323 SMN1Q16637 294 aaKnown RBP10.97□□□□□ -0.65
SYNE2-219ENST00000555323 KLHL22Q53GT1 634 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 C6orf141Q5SZD1 244 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 EGFL6Q8IUX8 553 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 SLC35F2Q8IXU6 374 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 C1orf174Q8IYL3 243 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 NUP37Q8NFH4 326 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 OR4F15Q8NGB8 312 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 SMAP2Q8WU79 429 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-219ENST00000555323 THEM6Q8WUY1 208 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 ASB17Q8WXJ9 295 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 LGALS12Q96DT0 336 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 AMELYQ99218 206 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 KCNJ15Q99712 375 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 AMBNQ9NP70 447 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 TBCCD1Q9NVR7 557 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 LAMP5Q9UJQ1 280 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 KLHDC2Q9Y2U9 406 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 RTTNQ86VV8 2226 aa10.97□□□□□ -0.65
SYNE2-219ENST00000555323 CADP27708 2225 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 C5orf49A4QMS7 147 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF878C9JN71 531 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF254O75437 659 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 PLAUP00749 431 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 IGHA1P01876 353 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 CCL2P13500 99 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 NR4A1P22736 598 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 DCTDP32321 178 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 ATP6V1E1P36543 226 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 OPRL1P41146 370 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 HTR5AP47898 357 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF684Q5T5D7 378 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 HIST2H2BCQ6DN03 193 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 TMEM154Q6P9G4 183 aa10.96□□□□□ -0.65
SYNE2-219ENST00000555323 KCTD18Q6PI47 426 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-219ENST00000555323 ZNF704Q6ZNC4 412 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-219ENST00000555323 COLCA1Q6ZS62 124 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms