RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DOK2O60496 412 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 MT-ND5P03915 603 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 CCKARP32238 428 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 TGFBR1P36897 503 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 NANOS3P60323 173 aaKnown RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 FAM27BQ5VT28 67 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 LIPNQ5VXI9 398 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 TMPRSS11AQ6ZMR5 421 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 Q6ZT83 130 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 MYPOPQ86VE0 399 aaPredicted RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 CLVS1Q8IUQ0 354 aaPredicted RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 YIPF7Q8N8F6 280 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 RPL3LQ92901 407 aaKnown RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 SLAMF6Q96DU3 332 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 OR8B4Q96RC9 309 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 DCLRE1CQ96SD1 692 aaKnown RBP9.41□□□□□ -0.9
TDP1-211ENST00000555178 FUNDC2Q9BWH2 189 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 SFXN3Q9BWM7 321 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 SIAEQ9HAT2 523 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 JKAMPQ9P055 326 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 SLC5A6Q9Y289 635 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 CEPT1Q9Y6K0 416 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 LRRK2Q5S007 2527 aa9.41□□□□□ -0.9
TDP1-211ENST00000555178 HSPB2A8KAH6 182 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 DVL2O14641 736 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 HLA-HP01893 362 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 CRHP06850 196 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 CD8BP10966 210 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 CD36P16671 472 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 ZNF32P17041 273 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 CELP19835 753 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 GUCA1AP43080 201 aaPredicted RBP9.4□□□□□ -0.9
TDP1-211ENST00000555178 CASP6P55212 293 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 ACTA2P62736 377 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 ACTG2P63267 376 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 MFGE8Q08431 387 aaPredicted RBP9.4□□□□□ -0.9
TDP1-211ENST00000555178 INSL4Q14641 139 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 HSPB2Q16082 182 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 STAC2Q6ZMT1 411 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 AKR7LQ8NHP1 331 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 BCL2L2Q92843 193 aaPredicted RBP9.4□□□□□ -0.9
TDP1-211ENST00000555178 TMEM203Q969S6 136 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 PPP1R14AQ96A00 147 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 YIPF6Q96EC8 236 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 BABAM2Q9NXR7 383 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 TMEM14AQ9Y6G1 99 aa9.4□□□□□ -0.9
TDP1-211ENST00000555178 OR6C65A6NJZ3 312 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 H3BSH0 61 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 AGFG2O95081 481 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 PNPP00491 289 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 COX5AP20674 150 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 GADD45AP24522 165 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 MPGP29372 298 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 OPRL1P41146 370 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 RGS6P49758 472 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 LSM3P62310 102 aaKnown RBP9.4□□□□□ -0.91
TDP1-211ENST00000555178 LSM6P62312 80 aaKnown RBP9.4□□□□□ -0.91
TDP1-211ENST00000555178 RPS25P62851 125 aaKnown RBP9.4□□□□□ -0.91
TDP1-211ENST00000555178 MLLT11Q13015 90 aaPredicted RBP9.4□□□□□ -0.91
TDP1-211ENST00000555178 GABRA6Q16445 453 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 ODF4Q2M2E3 257 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 CCDC92Q53HC0 331 aaPredicted RBP9.4□□□□□ -0.91
TDP1-211ENST00000555178 ZNF774Q6NX45 483 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 SLC16A12Q6ZSM3 486 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 SLC16A14Q7RTX9 510 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 KRT77Q7Z794 578 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 PHC2Q8IXK0 858 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 SYS1Q8N2H4 156 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 ZNF454Q8N9F8 522 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 OR1K1Q8NGR3 316 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 OR2AJ1Q8NGZ0 328 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 RNF133Q8WVZ7 376 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 TRMT61AQ96FX7 289 aaKnown RBP9.4□□□□□ -0.91
TDP1-211ENST00000555178 ZFP3Q96NJ6 502 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 C1QTNF6Q9BXI9 259 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 C1orf198Q9H425 327 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 RNF167Q9H6Y7 350 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 GALNT8Q9NY28 637 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 ZNF629Q9UEG4 869 aaPredicted RBP9.4□□□□□ -0.91
TDP1-211ENST00000555178 ST6GALNAC2Q9UJ37 374 aa9.4□□□□□ -0.91
TDP1-211ENST00000555178 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 METTL15A6NJ78 407 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 KRT8P05787 483 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 DBHP09172 617 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 NPR2P20594 1047 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 OPRM1P35372 400 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 CAPZA2P47755 286 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 ROM1Q03395 351 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 EGR3Q06889 387 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 AQP6Q13520 282 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 C4orf17Q53FE4 359 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 ARL9Q6T311 187 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 ZNF679Q8IYX0 411 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 WDR31Q8NA23 367 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 OR13C5Q8NGS8 318 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 MNTQ99583 582 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 PDCD1LG2Q9BQ51 273 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 OR51E2Q9H255 320 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 BRD7Q9NPI1 651 aa9.39□□□□□ -0.91
TDP1-211ENST00000555178 TRIM36Q9NQ86 728 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms