RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ARL9Q6T311 187 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 FBXW12Q6X9E4 464 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-213ENST00000554776 CBLN2Q8IUK8 224 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 PCP2Q8IVA1 136 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 SNX31Q8N9S9 440 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 LRRC75AQ8NAA5 344 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 OR52E2Q8NGJ4 325 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF596Q8TC21 504 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 OR51E1Q8TCB6 317 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 APH1BQ8WW43 257 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 SRSF12Q8WXF0 261 aaKnown RBP1.98□□□□□ -2.09
SCFD1-213ENST00000554776 CREB3L1Q96BA8 519 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 FOXC2Q99958 501 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 BCL7BQ9BQE9 202 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 UQCC2Q9BRT2 126 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 CHAC1Q9BUX1 264 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 NAA50Q9GZZ1 169 aaKnown RBP1.98□□□□□ -2.09
SCFD1-213ENST00000554776 OR2AG1Q9H205 316 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 SPNS1Q9H2V7 528 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 IFI27L2Q9H2X8 130 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 PIGUQ9H490 435 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 NOX3Q9HBY0 568 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 MRPS30Q9NP92 439 aaKnown RBP1.98□□□□□ -2.09
SCFD1-213ENST00000554776 TRMT112Q9UI30 125 aaKnown RBP1.98□□□□□ -2.09
SCFD1-213ENST00000554776 PLEKHG2Q9H7P9 1386 aa1.98□□□□□ -2.09
SCFD1-213ENST00000554776 ASTN1O14525 1302 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 GAKO14976 1311 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 H7C417 338 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 GABRPO00591 440 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 NME4O00746 187 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 PLPP1O14494 284 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 ZBTB5O15062 677 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 CASC3O15234 703 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 NVLO15381 856 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 RAD51CO43502 376 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 OXTP01178 125 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 HLA-HP01893 362 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 BCHEP06276 602 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 ADRB3P13945 408 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 TCP1P17987 556 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 OMGP23515 440 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 F2RP25116 425 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 U2AF2P26368 475 aaKnown RBP eCLIP1.97□□□□□ -2.092e-6■■■■□ 24.2
SCFD1-213ENST00000554776 RFC3P40938 356 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 RPS9P46781 194 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 CSNK1A1P48729 337 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 SLC11A1P49279 550 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 BCAP31P51572 246 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 RAP1AP62834 184 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 SEMG2Q02383 582 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 EIF4EBP2Q13542 120 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 DGCR6Q14129 220 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 PON2Q15165 354 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 PTGES3Q15185 160 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 TMEM255AQ5JRV8 349 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 SPESP1Q6UW49 350 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 ZFP2Q6ZN57 461 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 FAM92BQ6ZTR7 304 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF547Q8IVP9 402 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 C12orf56Q8IXR9 622 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 ENTHD1Q8IYW4 607 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 JAGN1Q8N5M9 183 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 FAM86B1Q8N7N1 296 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 ZNF321PQ8N8H1 164 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 LKAAEAR1Q8TD35 194 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 GPX8Q8TED1 209 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 TMEM230Q96A57 120 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 ISG20Q96AZ6 181 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 APH1AQ96BI3 265 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 RBMXL1Q96E39 390 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 FAM210BQ96KR6 192 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 SLC25A39Q9BZJ4 359 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 TPK1Q9H3S4 243 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 CYP3A43Q9HB55 503 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 MRM3Q9HC36 420 aaKnown RBP1.97□□□□□ -2.09
SCFD1-213ENST00000554776 CHRAC1Q9NRG0 131 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 MTFP1Q9UDX5 166 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 NACAE9PAV3 2078 aa1.97□□□□□ -2.09
SCFD1-213ENST00000554776 IGHV3-74A0A0B4J1X5 117 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 LOC100653049A0A140TA62 436 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 KRT34O76011 436 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 FGFR1OPO95684 399 aaKnown RBP1.96□□□□□ -2.1
SCFD1-213ENST00000554776 HBE1P02100 147 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 HLA-DPB1P04440 258 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 CD3GP09693 182 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 GABRG2P18507 467 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 PGAM1P18669 254 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 IL32P24001 234 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 UCNP55089 124 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 HERVK_113P61574 105 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 PPP1CBP62140 327 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 RAB11AP62491 216 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 RAD51Q06609 339 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 CDH17Q12864 832 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 ERCC8Q13216 396 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 RAB11BQ15907 218 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 DEFB116Q30KQ4 102 aa1.96□□□□□ -2.1
SCFD1-213ENST00000554776 GCSAMLQ5JQS6 135 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms