RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SSNA1O43805 119 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 WDR1O75083 606 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SC5DO75845 299 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 DDAH2O95865 285 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 C1QCP02747 245 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 GRPP07492 148 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 BPGMP07738 259 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 HMBSP08397 361 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ITGA5P08648 1049 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CSF3P09919 207 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ALDOCP09972 364 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CPN1P15169 458 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 FOLR1P15328 257 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 AREGP15514 252 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CRHBPP24387 322 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 KLRC2P26717 231 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 HOXD9P28356 352 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 COILP38432 576 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 IDH2P48735 452 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CLDN20P56880 219 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SLC37A1P57057 533 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OR2B8PP59922 312 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ERVFC1-1P60608 527 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ADARB1P78563 741 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 RBBP4Q09028 425 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 BST1Q10588 318 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 UBE2V1Q13404 147 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PRPSAP1Q14558 356 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OPCMLQ14982 345 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CYP51A1Q16850 503 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SLC22A6Q4U2R8 563 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 IFI44LQ53G44 452 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 EIPR1Q53HC9 387 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CLLU1OSQ5K130 101 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PLEKHS1Q5SXH7 462 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 COL5A1-AS1Q5SY13 56 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SAMD13Q5VXD3 122 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 EIF5AL1Q6IS14 154 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF774Q6NX45 483 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 FAM198BQ6UWH4 519 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 LINGO4Q6UY18 593 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF620Q6ZNG0 422 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 WDR5BQ86VZ2 330 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PTOV1Q86YD1 416 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF280BQ86YH2 543 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SERPINA12Q8IW75 414 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CCDC117Q8IWD4 279 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 C4orf19Q8IY42 314 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SLC34A3Q8N130 599 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PRELID2Q8N945 189 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 EXD3Q8N9H8 876 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 LMNTD1Q8N9Z9 388 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OR5L1Q8NGL2 311 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OR13C8Q8NGS7 320 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OR10K1Q8NGX5 313 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OR2T11Q8NH01 316 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 C16orf52Q8NHV5 167 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OLIG1Q8TAK6 271 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PIGXQ8TBF5 258 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 MAPK15Q8TD08 544 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CCDC107Q8WV48 283 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 THAP4Q8WY91 577 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 LRTOMTQ8WZ04 291 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 TFGQ92734 400 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 DNASE1L2Q92874 299 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 RCN3Q96D15 328 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 RNF125Q96EQ8 232 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 TRMT61AQ96FX7 289 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SLC35A4Q96G79 324 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PRR11Q96HE9 360 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ADGRG7Q96K78 797 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SENP8Q96LD8 212 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 RDH12Q96NR8 316 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PCYT2Q99447 389 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 S100A13Q99584 98 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SDHCQ99643 169 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 GINS4Q9BRT9 223 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 MARVELD1Q9BSK0 173 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 RIOK2Q9BVS4 552 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 FNDC11Q9BVV2 318 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 VN1R3Q9BXE9 311 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 BEX2Q9BXY8 128 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 TKTL2Q9H0I9 626 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 HRH4Q9H3N8 390 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PIGMQ9H3S5 423 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 CXorf36Q9H7Y0 433 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 WDR54Q9H977 334 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 ISYNA1Q9NPH2 558 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM9BQ9NQ34 198 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 OR2S2Q9NQN1 319 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 PNPOQ9NVS9 261 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 P4HTMQ9NXG6 502 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 MRTO4Q9UKD2 239 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 POMT2Q9UKY4 750 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 NPIPA1Q9UND3 350 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SAMD4AQ9UPU9 718 aaKnown RBP3.94□□□□□ -1.78
ATXN3-227ENST00000554491 SLC35A3Q9Y2D2 325 aa3.94□□□□□ -1.78
ATXN3-227ENST00000554491 NPTNQ9Y639 398 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms