RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 XPNPEP2O43895 674 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SULT1C4O75897 302 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 INMTO95050 263 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 AGR2O95994 175 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 TFP02787 698 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 MT-ND2P03891 347 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 ALOX5P09917 674 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 HNRNPCL4P0DMR1 293 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 LYNX1P0DP58 116 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 GSTM3P21266 225 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CPN2P22792 545 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CD40LGP29965 261 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 PTGDSP41222 190 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SLC15A1P46059 708 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CCT3P49368 545 aaKnown RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CRISP1P54107 249 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CRISP3P54108 245 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 B3GALT5-AS1P59052 145 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 IL1RL1Q01638 556 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 PLCXD2Q0VAA5 305 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SNTA1Q13424 505 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 AQP6Q13520 282 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SLC9A3R2Q15599 337 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SLX4IPQ5VYV7 408 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 ADNP2Q6IQ32 1131 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF367Q7RTV3 350 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 NUP54Q7Z3B4 507 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 C6orf120Q7Z4R8 191 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 GALNT5Q7Z7M9 940 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 RNF130Q86XS8 419 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 OR6Q1Q8NGQ2 317 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CDC26Q8NHZ8 85 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 NFKBIDQ8NI38 313 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 BBS10Q8TAM1 723 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 DYNC2LI1Q8TCX1 351 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SLC38A5Q8WUX1 472 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 APH1BQ8WW43 257 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 GGHQ92820 318 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 RIT1Q92963 219 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 MS4A6EQ96DS6 147 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 C1orf147Q96MC9 270 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 GPA33Q99795 319 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 FUZQ9BT04 418 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 COPS4Q9BT78 406 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 DCUN1D5Q9BTE7 237 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 MROQ9BYG7 248 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 KRTAP1-5Q9BYS1 174 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 POLR2J2Q9GZM3 115 aaKnown RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 CCDC90BQ9GZT6 254 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 AICDAQ9GZX7 198 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 NXF2Q9GZY0 626 aaKnown RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 NAA50Q9GZZ1 169 aaKnown RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 POLR2J3Q9H1A7 115 aaKnown RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SLC35C2Q9NQQ7 365 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 SIRT3Q9NTG7 399 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 MRPS18AQ9NVS2 196 aaKnown RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 LYARQ9NX58 379 aaKnown RBP4.83□□□□□ -1.64
ATXN3-226ENST00000554350 P2RX2Q9UBL9 471 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 TMCC3Q9ULS5 477 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 WNK2Q9Y3S1 2297 aa4.83□□□□□ -1.64
ATXN3-226ENST00000554350 HEATR1Q9H583 2144 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 DUXAA6NLW8 204 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ATP6V1G2-DDX39BF2Z307 99 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 HMGN4O00479 90 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 DHHO43323 396 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 CXCL13O43927 109 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 GMFGO60234 142 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 PFDN1O60925 122 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 RAD51DO75771 328 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 MPZL1O95297 269 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 IL33O95760 270 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 LGI1O95970 557 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 OPN1LWP04000 364 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 H1F0P07305 194 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 GUSBP08236 651 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SELEP16581 610 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 CD36P16671 472 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 NTSP30990 170 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 FMO3P31513 532 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 MPIP34949 423 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 TGFBR2P37173 567 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 IFNGR2P38484 337 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ETV6P41212 452 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 GPR6P46095 362 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 KHKP50053 298 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 IDH3GP51553 393 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 PPP5CP53041 499 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 CDH12P55289 794 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 DSCR4P56555 118 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 KRTAP10-3P60369 221 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 COPZ1P61923 177 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SPIBQ01892 262 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 ZNF45Q02386 682 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 PPP1R8Q12972 351 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 KRR1Q13601 381 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SPCS2Q15005 226 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 OXA1LQ15070 435 aa4.82□□□□□ -1.64
ATXN3-226ENST00000554350 PTGES3Q15185 160 aaKnown RBP4.82□□□□□ -1.64
ATXN3-226ENST00000554350 SEC23BQ15437 767 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms