RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 IL17RDQ8NFM7 739 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 OR10S1Q8NGN2 331 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 OR1F12Q8NHA8 337 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 LGALS12Q96DT0 336 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 PIK3IP1Q96FE7 263 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 AMELYQ99218 206 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 MNTQ99583 582 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 ABHD6Q9BV23 337 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 HDHD2Q9H0R4 259 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 MRPS18AQ9NVS2 196 aaKnown RBP10.62□□□□□ -0.71
SHMT2-209ENST00000553949 LAMP5Q9UJQ1 280 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 EXOGQ9Y2C4 368 aaKnown RBP10.62□□□□□ -0.71
SHMT2-209ENST00000553949 TMEM14AQ9Y6G1 99 aa10.62□□□□□ -0.71
SHMT2-209ENST00000553949 LOC100509620A0A075B734 347 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 J3QRE1 110 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 ABCD4O14678 606 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 GOSR1O95249 250 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 CRYAAP02489 173 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 CD3EP07766 207 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 LYNP07948 512 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 OR2T7P0C7T2 308 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 CCL2P13500 99 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 ZNF35P13682 527 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 APLNRP35414 380 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 GDI2P50395 445 aaKnown RBP10.61□□□□□ -0.71
SHMT2-209ENST00000553949 SPOCK1Q08629 439 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 RAB40BQ12829 278 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 ECH1Q13011 328 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 TBC1D28Q2M2D7 210 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 C6orf141Q5SZD1 244 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 SPATC1Q76KD6 591 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 PAQR4Q8N4S7 273 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-209ENST00000553949 OR10H4Q8NGA5 316 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 OR1J2Q8NGS2 313 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 OR2T27Q8NH04 317 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 THEM6Q8WUY1 208 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 RNF133Q8WVZ7 376 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 SLAMF6Q96DU3 332 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 POM121L2Q96KW2 1035 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 HS3ST6Q96QI5 342 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 COQ7Q99807 217 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 ATF6BQ99941 703 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 KCNS3Q9BQ31 491 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 CENPMQ9NSP4 180 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 DDX28Q9NUL7 540 aaKnown RBP10.61□□□□□ -0.71
SHMT2-209ENST00000553949 ATPIF1Q9UII2 106 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 COPS3Q9UNS2 423 aa10.61□□□□□ -0.71
SHMT2-209ENST00000553949 ICE1Q9Y2F5 2266 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 BAHCC1Q9P281 2608 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 IGHV2OR16-5A0A0B4J2B6 119 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 A0A1W2PQL4 384 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-209ENST00000553949 C5orf49A4QMS7 147 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 ZNF878C9JN71 531 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 PHYHO14832 338 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 XPNPEP2O43895 674 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 FAM20BO75063 409 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 FADS2O95864 444 aaKnown RBP10.6□□□□□ -0.71
SHMT2-209ENST00000553949 CCNOP22674 350 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 CALCRP30988 508 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 OPRL1P41146 370 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 SLC15A1P46059 708 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 CXCR4P61073 352 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 ACTC1P68032 377 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 ACTA1P68133 377 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 TAF13Q15543 124 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 KRTAP27-1Q3LI81 207 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 KLHL22Q53GT1 634 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 HIST2H2BCQ6DN03 193 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 KRT80Q6KB66 452 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 ADAM5Q6NVV9 412 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 RHOUQ7L0Q8 258 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 PIAS4Q8N2W9 510 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-209ENST00000553949 RFLNBQ8N5W9 214 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 BPIFB6Q8NFQ5 453 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 OR52I1Q8NGK6 324 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 ASB17Q8WXJ9 295 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 SLC7A6Q92536 515 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 RADILQ96JH8 1075 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 TBX5Q99593 518 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 TMEM204Q9BSN7 226 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 COPS4Q9BT78 406 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 CDH20Q9HBT6 801 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 PLCXD1Q9NUJ7 323 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 RNF115Q9Y4L5 304 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 PCDHGB5Q9Y5G0 923 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 PCDHGB1Q9Y5G3 927 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 DOPEY2Q9Y3R5 2298 aa10.6□□□□□ -0.71
SHMT2-209ENST00000553949 UTP20O75691 2785 aaKnown RBP10.6□□□□□ -0.71
SHMT2-209ENST00000553949 IRGMA1A4Y4 181 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 FAM221AA4D161 298 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 PRR32B1ATL7 298 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 ZNF670-ZNF695F2Z2N8 137 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 ATP6V1G2-DDX39BF2Z307 99 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 F5H5K5 113 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 CTAG2O75638 210 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 DBHP09172 617 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 CSNK2BP67870 215 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 GALK2Q01415 458 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 ROM1Q03395 351 aa10.59□□□□□ -0.71
SHMT2-209ENST00000553949 RSPO1Q2MKA7 263 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms