RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NPR2P20594 1047 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 AGTR1P30556 359 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF85Q03923 595 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 EGR3Q06889 387 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 ACSM1Q08AH1 577 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 DBPQ10586 325 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-208ENST00000553868 HSPB2Q16082 182 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 CDONQ4KMG0 1287 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 OR2G6Q5TZ20 316 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 TMEM211Q6ICI0 200 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 KCTD18Q6PI47 426 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-208ENST00000553868 LYPD4Q6UWN0 246 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 FOXL2NBQ6ZUU3 175 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 DPY19L4Q7Z388 723 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 OR2AJ1Q8NGZ0 328 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 SPRYD4Q8WW59 207 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-208ENST00000553868 C11orf40Q8WZ69 217 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 TMIGD2Q96BF3 282 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 ZFP3Q96NJ6 502 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 OR5M11Q96RB7 305 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF649Q9BS31 505 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 RBM24Q9BX46 236 aaKnown RBP12.7□□□□□ -0.38
SHMT2-208ENST00000553868 TRIM36Q9NQ86 728 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 MRPL22Q9NWU5 206 aaKnown RBP12.7□□□□□ -0.38
SHMT2-208ENST00000553868 BABAM2Q9NXR7 383 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 UPB1Q9UBR1 384 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 CLEC4AQ9UMR7 237 aa12.7□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF587BE7ETH6 402 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 J3QLW9 94 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 CCRL2O00421 344 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 CRLF1O75462 422 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 SULT1C4O75897 302 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 CRHP06850 196 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF19P17023 458 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 ALOX5APP20292 161 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 MSR1P21757 451 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 GBX2P52951 348 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-208ENST00000553868 LSM6P62312 80 aaKnown RBP12.69□□□□□ -0.38
SHMT2-208ENST00000553868 MRPS34P82930 218 aaKnown RBP12.69□□□□□ -0.38
SHMT2-208ENST00000553868 PCK2Q16822 640 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 TIMM50Q3ZCQ8 353 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 C1orf185Q5T7R7 199 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-208ENST00000553868 CLVS1Q8IUQ0 354 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-208ENST00000553868 LIX1LQ8IVB5 337 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF420Q8TAQ5 688 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-208ENST00000553868 THEM6Q8WUY1 208 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 GATAD2BQ8WXI9 593 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 UFD1Q92890 307 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 DGCR14Q96DF8 476 aaKnown RBP12.69□□□□□ -0.38
SHMT2-208ENST00000553868 FOXN4Q96NZ1 517 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 NELFAQ9H3P2 528 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 GPR35Q9HC97 309 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 POLE4Q9NR33 117 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
SHMT2-208ENST00000553868 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 METTL15A6NJ78 407 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 RPL36A-HNRNPH2H7BZ11 118 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF701M0R085 212 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 UPK3AO75631 287 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 MPZL1O95297 269 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 GPANK1O95872 356 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 CD36P16671 472 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 RGS6P49758 472 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 HCCSP53701 268 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 TMBIM6P55061 237 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 ROR2Q01974 943 aaKnown RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 EIF2B1Q14232 305 aaKnown RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 SGCAQ16586 387 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 NRN1LQ496H8 165 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 Q5PR19 223 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 PHYHD1Q5SRE7 291 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 GPR107Q5VW38 600 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 SHEQ5VZ18 495 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF544Q6NX49 715 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 FAM214BQ7L5A3 538 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 VASH1Q7L8A9 365 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 P2RY8Q86VZ1 359 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF485Q8NCK3 441 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 SMAP2Q8WU79 429 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 C4orf36Q96KX1 117 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 Q96MF0 132 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 BCL7BQ9BQE9 202 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 WACQ9BTA9 647 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 TP63Q9H3D4 680 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-208ENST00000553868 C1orf198Q9H425 327 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 CRLF2Q9HC73 371 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 GNG8Q9UK08 70 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 IKZF2Q9UKS7 526 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 UGT2A1Q9Y4X1 527 aa12.68□□□□□ -0.38
SHMT2-208ENST00000553868 ARID1AO14497 2285 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 TRIM64BA6NI03 449 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 HAX1O00165 279 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 ZNF254O75437 659 aa12.67□□□□□ -0.38
SHMT2-208ENST00000553868 FARS2O95363 451 aaKnown RBP12.67□□□□□ -0.38
SHMT2-208ENST00000553868 CPEP16870 476 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms