RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PRRG3Q9BZD7 231 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 BCL2L14Q9BZR8 327 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 NUAK2Q9H093 628 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 EGLN3Q9H6Z9 239 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 ELOVL3Q9HB03 270 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 RPRD1BQ9NQG5 326 aaKnown RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 ERVK13-1Q9NX77 482 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 IL20Q9NYY1 176 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 H2AFY2Q9P0M6 372 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 COA3Q9Y2R0 106 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-209ENST00000553855 AP4S1Q9Y587 144 aa7.21□□□□□ -1.26
PSEN1-209ENST00000553855 IGKV1D-43A0A0B4J1Z2 117 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 A0A1W2PPW3 197 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 C5orf49A4QMS7 147 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF503-AS2A6NEH8 195 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 FAM171A2A8MVW0 826 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 H7C417 338 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 OVOL3O00110 214 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 SGCEO43556 437 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 SSX4O60224 188 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 DOK2O60496 412 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 TIPRLO75663 272 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 SOX14O95416 240 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 SNAP29O95721 258 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 HMGN1P05114 100 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 CSF3P09919 207 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 CTLA4P16410 223 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF26P17031 533 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-209ENST00000553855 APEX1P27695 318 aaKnown RBP7.2□□□□□ -1.26
PSEN1-209ENST00000553855 GCH1P30793 250 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 THBS4P35443 961 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 CDKN2AP42771 156 aaKnown RBP7.2□□□□□ -1.26
PSEN1-209ENST00000553855 HTR5AP47898 357 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 BLVRAP53004 296 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 LSM6P62312 80 aaKnown RBP7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ADAM8P78325 824 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 TEKQ02763 1124 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 AQP6Q13520 282 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 EFNB3Q15768 340 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 CLEC12BQ2HXU8 276 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 CD300LDQ6UXZ3 194 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 FOXL2NBQ6ZUU3 175 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-209ENST00000553855 PAPD5Q8NDF8 572 aaKnown RBP7.2□□□□□ -1.26
PSEN1-209ENST00000553855 AKR7LQ8NHP1 331 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 FGFBP3Q8TAT2 258 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 HTRA1Q92743 480 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 NABP1Q96AH0 204 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 OTULINQ96BN8 352 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 NRBF2Q96F24 287 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 Q96MF0 132 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 COG8Q96MW5 612 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 FEVQ99581 238 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 KCNJ15Q99712 375 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF416Q9BWM5 594 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 OR2H1Q9GZK4 316 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 RACGAP1Q9H0H5 632 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 MS4A5Q9H3V2 200 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 SLCO1C1Q9NYB5 712 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 PLEK2Q9NYT0 353 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF224Q9NZL3 707 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ENOPH1Q9UHY7 261 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 B9D1Q9UPM9 204 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 UGT2A1Q9Y4X1 527 aa7.2□□□□□ -1.26
PSEN1-209ENST00000553855 ZFHX3Q15911 3703 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ABCA4P78363 2273 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF561-AS1K7EIQ3 104 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 M0R233 179 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ABHD16AO95870 558 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 CD8AP01732 235 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 MMP7P09237 267 aaPredicted RBP7.19□□□□□ -1.26
PSEN1-209ENST00000553855 COX5BP10606 129 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 CCL2P13500 99 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF35P13682 527 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 OSMP13725 252 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 FOSL1P15407 271 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF23P17027 643 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 PCSK6P29122 969 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 FMO3P31513 532 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 GRK5P34947 590 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 EVX1P49640 407 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 PPOXP50336 477 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 EFNA4P52798 201 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 UCP2P55851 309 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 KLF3P57682 345 aaPredicted RBP7.19□□□□□ -1.26
PSEN1-209ENST00000553855 FXYD6P3P58550 94 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 PSG4Q00888 419 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 HGFACQ04756 655 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 EGR3Q06889 387 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ADIPOQQ15848 244 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 CARTPTQ16568 116 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF718Q3SXZ3 478 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF770Q6IQ21 691 aaPredicted RBP7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF774Q6NX45 483 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 SLC27A4Q6P1M0 643 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 SHQ1Q6PI26 577 aaKnown RBP7.19□□□□□ -1.26
PSEN1-209ENST00000553855 PTCHD4Q6ZW05 846 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 ZDHHC13Q8IUH4 622 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 SVOPLQ8N434 492 aa7.19□□□□□ -1.26
PSEN1-209ENST00000553855 LNX2Q8N448 690 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms