RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 TRIOBPQ9H2D6 2365 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 TUBGCP6Q96RT7 1819 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 IGHV5-51A0A0C4DH38 117 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 GOLGA8QA0A0J9YX86 632 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 A0A1B0GVG6 124 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ERICH2A1L162 156 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 FUOMA2VDF0 154 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 RBMY1BA6NDE4 496 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 RBMY1EA6NEQ0 496 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 ZNF705GA8MUZ8 300 aaPredicted RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 GOLGA8KD6RF30 607 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 HAS3O00219 553 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 AKR7A2O43488 359 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 GMFGO60234 142 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 STX10O60499 249 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 UPK3AO75631 287 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 NSA2O95478 260 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 ALDOBP05062 364 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 DCNP07585 359 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 CSF3P09919 207 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 IQCF3P0C7M6 154 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 RBMY1DP0C7P1 496 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 UBTFL1P0CB47 393 aaPredicted RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 RBMY1A1P0DJD3 496 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 OR8G3PP0DMU2 310 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 COX5BP10606 129 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 CBR1P16152 277 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ZNF30P17039 623 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 CELP19835 753 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 GNA11P29992 359 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 LCN1P31025 176 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 GTF2H1P32780 548 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ATP5C1P36542 298 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 OPRD1P41143 372 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 CCT3P49368 545 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 CASP4P49662 377 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 AIF1P55008 147 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 FGF8P55075 233 aaPredicted RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 ACTR3P61158 418 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 YWHAEP62258 255 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 SPIBQ01892 262 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 SRSF5Q13243 272 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 DYNC1I2Q13409 638 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 OR5I1Q13606 314 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 FZD2Q14332 565 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 DUSP7Q16829 419 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 TTLL9Q3SXZ7 439 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 DNAL1Q4LDG9 190 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ATAD3BQ5T9A4 648 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 PIP5KL1Q5T9C9 394 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 TTC23Q5W5X9 447 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 DUPD1Q68J44 220 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 C1orf94Q6P1W5 598 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 KCNIP4Q6PIL6 250 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 SLC25A34Q6PIV7 304 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 RTL4Q6ZR62 310 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ARHGAP18Q8N392 663 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 OR2T3Q8NH03 318 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ANGPTL6Q8NI99 470 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 PHF10Q8WUB8 498 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 TSEN15Q8WW01 171 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 IFT81Q8WYA0 676 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 LRRC58Q96CX6 371 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 TPD52L3Q96J77 140 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 PPP1R36Q96LQ0 422 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 TRNT1Q96Q11 434 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 CLCC1Q96S66 551 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 PLIN2Q99541 437 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ZBTB18Q99592 522 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 SLC29A1Q99808 456 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 DHRS9Q9BPW9 319 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 SELENOSQ9BQE4 189 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 BBS2Q9BXC9 721 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 RIBC2Q9H4K1 309 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 RNF167Q9H6Y7 350 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 RMND5AQ9H871 391 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 LRRC40Q9H9A6 602 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 PARVBQ9HBI1 364 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 MRPS30Q9NP92 439 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 MRPL40Q9NQ50 206 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 UFSP2Q9NUQ7 469 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 HYPKQ9NX55 129 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 CTSFQ9UBX1 484 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ERGIC3Q9Y282 383 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 MRPS33Q9Y291 106 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 FAM32AQ9Y421 112 aaKnown RBP1.69□□□□□ -2.14
VRK1-202ENST00000553683 TIMM10BQ9Y5J6 103 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 PUS1Q9Y606 427 aaKnown RBP eCLIP1.69□□□□□ -2.14
VRK1-202ENST00000553683 RFNGQ9Y644 331 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ADAMTSL3P82987 1691 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 ANKRD30AQ9BXX3 1397 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 KIF21BO75037 1637 aa1.69□□□□□ -2.14
VRK1-202ENST00000553683 NFASCO94856 1347 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 ELP1O95163 1332 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 BRWD3Q6RI45 1802 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 A0A075B6Q4 140 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 OR5B21A6NL26 309 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 SNTNA6NMZ2 147 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 COLCA2A8K830 154 aa1.68□□□□□ -2.14
VRK1-202ENST00000553683 PSMD11O00231 422 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms