RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 AGAP6Q5VW22 663 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 MEPCEQ7L2J0 689 aaKnown RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 DCXRQ7Z4W1 244 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 MUC15Q8N387 334 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 TMEM171Q8WVE6 324 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 CYGBQ8WWM9 190 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 IPCEF1Q8WWN9 437 aaPredicted RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 PIGTQ969N2 578 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 TEAD3Q99594 435 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 ATF6BQ99941 703 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 BCL2L14Q9BZR8 327 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 OR51B6Q9H340 312 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 HEATR1Q9H583 2144 aaKnown RBP11.97□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF442Q9H7R0 627 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 ELOVL3Q9HB03 270 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 FAM118AQ9NWS6 357 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 PLEKHA6Q9Y2H5 1048 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 CRYBG3Q68DQ2 2970 aa11.97□□□□□ -0.49
TUBB3-202ENST00000553656 CACNA1DQ01668 2161 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 LOC100509620A0A075B734 347 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 SELENOFO60613 162 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 LCKP06239 509 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 BMP4P12644 408 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 TTKP33981 857 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 THBS4P35443 961 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 GLRXP35754 106 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 UCP2P55851 309 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 HIST1H3AP68431 136 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 EFNB1P98172 346 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 PCK2Q16822 640 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 HIST2H3PS2Q5TEC6 136 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 MEDAGQ5VYS4 303 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 TTC23Q5W5X9 447 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 HIST2H3AQ71DI3 136 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 DPY19L4Q7Z388 723 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 BCDIN3DQ7Z5W3 292 aaKnown RBP11.96□□□□□ -0.49
TUBB3-202ENST00000553656 TIGD4Q8IY51 512 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 PAQR4Q8N4S7 273 aaPredicted RBP11.96□□□□□ -0.49
TUBB3-202ENST00000553656 DHRSXQ8N5I4 330 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 NINJ1Q92982 152 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 SPTSSAQ969W0 71 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 MAP6Q96JE9 813 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 C4orf45Q96LM5 186 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 DCLRE1CQ96SD1 692 aaKnown RBP11.96□□□□□ -0.49
TUBB3-202ENST00000553656 CNN2Q99439 309 aaKnown RBP11.96□□□□□ -0.49
TUBB3-202ENST00000553656 COPS4Q9BT78 406 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 LIME1Q9H400 295 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 CXorf56Q9H5V9 222 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 MARCH7Q9H992 704 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 CENPMQ9NSP4 180 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 DNAJC27Q9NZQ0 273 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 WARS2Q9UGM6 360 aaKnown RBP11.96□□□□□ -0.49
TUBB3-202ENST00000553656 LAMP3Q9UQV4 416 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 RRP15Q9Y3B9 282 aaKnown RBP11.96□□□□□ -0.49
TUBB3-202ENST00000553656 GRIP1Q9Y3R0 1128 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 CMAHPQ9Y471 501 aa11.96□□□□□ -0.49
TUBB3-202ENST00000553656 CENPEQ02224 2701 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 CADP27708 2225 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 CCDC182A6NF36 153 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 ZNF878C9JN71 531 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SLC16A6O15403 523 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 MRPL3P09001 348 aaKnown RBP11.95□□□□□ -0.5
TUBB3-202ENST00000553656 OR4A8P0C604 315 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 HTR1FP30939 366 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 ATP6V1E1P36543 226 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SERPINF1P36955 418 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SLC15A1P46059 708 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 RGS6P49758 472 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 NUDT6P53370 316 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SELENOVP59797 346 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SNRPGP62308 76 aaKnown RBP11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SNRPD2P62316 118 aaKnown RBP11.95□□□□□ -0.5
TUBB3-202ENST00000553656 NKX6-1P78426 367 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-202ENST00000553656 POU4F2Q12837 409 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 RIPK1Q13546 671 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 GGTLC2Q14390 218 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 RGS7BPQ6MZT1 257 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SLC16A9Q7RTY1 509 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 C1orf174Q8IYL3 243 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 OR1J1Q8NGS3 322 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 ABHD4Q8TB40 342 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 THEM6Q8WUY1 208 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 SLAMF6Q96DU3 332 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 Q96MT0 163 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 ZNF582Q96NG8 517 aaPredicted RBP11.95□□□□□ -0.5
TUBB3-202ENST00000553656 YIPF3Q9GZM5 350 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 CLN6Q9NWW5 311 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 LAMP5Q9UJQ1 280 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.95□□□□□ -0.5
TUBB3-202ENST00000553656 TMEM14AQ9Y6G1 99 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 CELSR2Q9HCU4 2923 aa11.95□□□□□ -0.5
TUBB3-202ENST00000553656 F5H5K5 113 aa11.94□□□□□ -0.5
TUBB3-202ENST00000553656 GPRIN2O60269 458 aa11.94□□□□□ -0.5
TUBB3-202ENST00000553656 SMPD2O60906 423 aa11.94□□□□□ -0.5
TUBB3-202ENST00000553656 ATE1O95260 518 aa11.94□□□□□ -0.5
TUBB3-202ENST00000553656 ATP6V1G2O95670 118 aa11.94□□□□□ -0.5
TUBB3-202ENST00000553656 LYNP07948 512 aa11.94□□□□□ -0.5
TUBB3-202ENST00000553656 SOD3P08294 240 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms