RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MSR1P21757 451 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 C21orf33P30042 268 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 PYCR1P32322 319 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR3A2P47893 321 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ENTPD1P49961 510 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 PSMD7P51665 324 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 GBX2P52951 348 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CDH15P55291 814 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SH3BGRP55822 239 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 WNT4P56705 351 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 LCN6P62502 163 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ADAM8P78325 824 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MRPS34P82930 218 aaKnown RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 BDH1Q02338 343 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ACSM1Q08AH1 577 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 GPR50Q13585 617 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 IRF3Q14653 427 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SPHARQ15513 63 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MED22Q15528 200 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TAF13Q15543 124 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TRAM1Q15629 374 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TIMM50Q3ZCQ8 353 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CCDC58Q4VC31 144 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SYT6Q5T7P8 510 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 LINC01590Q5TEZ4 76 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 FAM27BQ5VT28 67 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 FOXB2Q5VYV0 432 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 FBXW9Q5XUX1 488 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SLC18B1Q6NT16 456 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 DEGS2Q6QHC5 323 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 C19orf48Q6RUI8 117 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 B3GNT6Q6ZMB0 384 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF367Q7RTV3 350 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 FAM220AQ7Z4H9 259 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 FGD2Q7Z6J4 655 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 KRT77Q7Z794 578 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 LHFPL3Q86UP9 236 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CDC20BQ86Y33 519 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZGRF1Q86YA3 2104 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ERI1Q8IV48 349 aaKnown RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 IQCF2Q8IXL9 164 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TIGD4Q8IY51 512 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TMEM123Q8N131 208 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SYS1Q8N2H4 156 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 UBE2J2Q8N2K1 259 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZIC4Q8N9L1 334 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 Q8NA96 180 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ST6GALNAC3Q8NDV1 305 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 BBS1Q8NFJ9 593 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 GJC3Q8NFK1 279 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR10H4Q8NGA5 316 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR4F15Q8NGB8 312 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR51L1Q8NGJ5 315 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR6K3Q8NGY3 331 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR6N2Q8NGY6 317 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR52N1Q8NH53 320 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OTOSQ8NHW6 89 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MBD3L2Q8NHZ7 208 aaPredicted RBP4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ABHD3Q8WU67 409 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 THEM6Q8WUY1 208 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 NSMAFQ92636 917 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 LRRC46Q96FV0 321 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TSSK2Q96PF2 358 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SLX1AQ9BQ83 275 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 TTYH2Q9BSA4 534 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 HCAR1Q9BXC0 346 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MROQ9BYG7 248 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 FAM192AQ9GZU8 254 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 OR10A2Q9H208 303 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 NELFAQ9H3P2 528 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 C1orf198Q9H425 327 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SP140LQ9H930 580 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 SIAEQ9HAT2 523 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ADGRL4Q9HBW9 690 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 GPR35Q9HC97 309 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ACOT13Q9NPJ3 140 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 PLSCR4Q9NRQ2 329 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ASF1BQ9NVP2 202 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 BABAM2Q9NXR7 383 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CLCF1Q9UBD9 225 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 CDC42EP3Q9UKI2 254 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 PROCRQ9UNN8 238 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 ZNF835Q9Y2P0 537 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 POLR1DQ9Y2S0 133 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 DMDP11532 3685 aa4.41□□□□□ -1.7
VTI1B-202ENST00000553619 MED12LQ86YW9 2145 aa4.4□□□□□ -1.7
VTI1B-202ENST00000553619 PTPRQQ9UMZ3 2332 aa4.4□□□□□ -1.7
VTI1B-202ENST00000553619 SMIM31A0A1B0GVY4 71 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TVP23AA6NH52 213 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 FAM171A2A8MVW0 826 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 E9PLN8 166 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 J3QLW9 94 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 J3QRE1 110 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 DCTN6O00399 190 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TGM6O95932 706 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 SERPINA3P01011 423 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 PTHP01270 115 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 TFAP2AP05549 437 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 HTR1AP08908 422 aa4.4□□□□□ -1.71
VTI1B-202ENST00000553619 CST2P09228 141 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms