RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 CALHM3Q86XJ0 350 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 MEX3DQ86XN8 651 aaKnown RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CDK20Q8IZL9 346 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 FAM71CQ8NEG0 241 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 GPR32P1Q8NGA4 272 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 OR4D11Q8NGI4 311 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 OR6K3Q8NGY3 331 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ADAMTS16Q8TE57 1224 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SLC38A4Q969I6 547 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ERGIC1Q969X5 290 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SLC25A28Q96A46 364 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 APH1AQ96BI3 265 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 MUCL1Q96DR8 90 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 PIK3IP1Q96FE7 263 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SLC41A3Q96GZ6 507 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ADGRG7Q96K78 797 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SEPHS2Q99611 448 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 EPYCQ99645 322 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 GPATCH1Q9BRR8 931 aaKnown RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 COQ10BQ9H8M1 238 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF226Q9NYT6 803 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CISD1Q9NZ45 108 aaKnown RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 RIMS3Q9UJD0 308 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 RPS6KA6Q9UK32 745 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 ANKRD17O75179 2603 aaKnown RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 DSPPQ9NZW4 1301 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 SETXQ7Z333 2677 aaKnown RBP4.1□□□□□ -1.75
ATXN3-220ENST00000553491 CADP27708 2225 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 MED13LQ71F56 2210 aa4.1□□□□□ -1.75
ATXN3-220ENST00000553491 RAI1Q7Z5J4 1906 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ARID1AO14497 2285 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 A0A087WUJ7 227 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 LRRN3E7EW58 273 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 hCG_2039718K7EN88 272 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 FXYD1O00168 92 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 FAAHO00519 579 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 SOCS2O14508 198 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 GYG2O15488 501 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RNF13O43567 381 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 SS18L1O75177 396 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RAD51DO75771 328 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 TSPAN9O75954 239 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 DIRAS1O95057 198 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 CGAP01215 116 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 IFNW1P05000 195 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 IFI30P13284 250 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ARSBP15848 533 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF182P17025 639 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 GABRB1P18505 474 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 FUT1P19526 365 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 UGT2B10P36537 528 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 PEX19P40855 299 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 CAPZA2P47755 286 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 COMPP49747 757 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF83P51522 516 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 FOXG1P55316 489 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 KRTAP10-9P60411 292 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ZP1P60852 638 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 TFF3Q07654 80 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NPTX1Q15818 432 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NRF1Q16656 503 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 CDONQ4KMG0 1287 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 IFI44LQ53G44 452 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 SAMD4BQ5PRF9 694 aaKnown RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 C6orf141Q5SZD1 244 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 FAM91A1Q658Y4 838 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF613Q6PF04 617 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 PAQR6Q6TCH4 344 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 HACD2Q6Y1H2 254 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 GLDNQ6ZMI3 551 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF730Q6ZMV8 503 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 Q6ZSV7 163 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF367Q7RTV3 350 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NET1Q7Z628 596 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NKAIN4Q8IVV8 208 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 GPR137CQ8N3F9 429 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 LRRC17Q8N6Y2 441 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 LSMEM1Q8N8F7 131 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RBM15BQ8NDT2 890 aaKnown RBP4.09□□□□□ -1.75
ATXN3-220ENST00000553491 STEAP2Q8NFT2 490 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 OR9K2Q8NGE7 335 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 OR6N1Q8NGY5 312 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 OR52N5Q8NH56 324 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 OR52J3Q8NH60 311 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 MFSD8Q8NHS3 518 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RNF128Q8TEB7 428 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 FAM222BQ8WU58 562 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NRGNQ92686 78 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 MCUR1Q96AQ8 359 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 OTULINQ96BN8 352 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 S100PBPQ96BU1 408 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 URB1-AS1Q96HZ7 61 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 RADILQ96JH8 1075 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 NSMCE2Q96MF7 247 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 TMEM68Q96MH6 324 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF570Q96NI8 536 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 OXGR1Q96P68 337 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 ARHGDIGQ99819 225 aa4.09□□□□□ -1.75
ATXN3-220ENST00000553491 FAM110AQ9BQ89 295 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms