RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 SNRNP70P08621 437 aaKnown RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 IL3P08700 152 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 SBK2P0C263 348 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 OR8G3PP0DMU2 310 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 UROSP10746 265 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 PRPS2P11908 318 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NCF1P14598 390 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TUBG1P23258 451 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 IVDP26440 423 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 STX2P32856 288 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 HTR3AP46098 478 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 ATP12AP54707 1039 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 ALDH18A1P54886 795 aaKnown RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CDH13P55290 713 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 UCP2P55851 309 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 ZP1P60852 638 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 GNB2P62879 340 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 MERTKQ12866 999 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NPRL3Q12980 569 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CEACAM16Q2WEN9 425 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 GFOD2Q3B7J2 385 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NSUN5P1Q3KNT7 163 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 C14orf177Q52M58 125 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 SPIN4Q56A73 249 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 SPRNQ5BIV9 151 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TTMPQ5BVD1 217 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 FAM71E1Q6IPT2 247 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CDC73Q6P1J9 531 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM107Q6UX40 140 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CYS1Q717R9 158 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 H1FNTQ75WM6 255 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 PIWIL3Q7Z3Z3 882 aaKnown RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CCDC91Q7Z6B0 441 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 KRT77Q7Z794 578 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 EPHX4Q8IUS5 362 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 VSTM4Q8IW00 320 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CCDC170Q8IYT3 715 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 MMGT1Q8N4V1 131 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 FAM71E2Q8N5Q1 922 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 C1orf52Q8N6N3 182 aaKnown RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TEX9Q8N6V9 391 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 UBL4BQ8N7F7 174 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 FAM76AQ8TAV0 307 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 STAG3L4Q8TBR4 150 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 PIFOQ8TCI5 191 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 SLC7A13Q8TCU3 470 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 GPR151Q8TDV0 419 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 C11orf40Q8WZ69 217 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 PIK3R3Q92569 461 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NSMAFQ92636 917 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TNFRSF14Q92956 283 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 METTL2AQ96IZ6 378 aaKnown RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 OR2M2Q96R28 347 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 GPR22Q99680 433 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 ARHGDIGQ99819 225 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TMEM246Q9BRR3 403 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NAA11Q9BSU3 229 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 SLC19A3Q9BZV2 496 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 OR11A1Q9GZK7 315 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 PPA2Q9H2U2 334 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CTPS2Q9NRF8 586 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TUBG2Q9NRH3 451 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NMRK1Q9NWW6 199 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 NSMCE4AQ9NXX6 385 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CD274Q9NZQ7 290 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 MRPL15Q9P015 296 aaKnown RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 SENP1Q9P0U3 644 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 B3GAT1Q9P2W7 334 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 VPS29Q9UBQ0 182 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 CLN8Q9UBY8 286 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TBK1Q9UHD2 729 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 PACSIN2Q9UNF0 486 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 SLC12A4Q9UP95 1085 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 RASD1Q9Y272 281 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 RNF11Q9Y3C5 154 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 TSSC4Q9Y5U2 329 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-223ENST00000551623 HECTD4Q9Y4D8 3996 aa1.8□□□□□ -2.12
PTCH1-223ENST00000551623 ARHGAP32A7KAX9 2087 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SRRM2Q9UQ35 2752 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 A0A096LPK6 155 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 IGLV5-52A0A0A0MRZ9 124 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FAM90A18PA6NE21 464 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FAM90A16PA6NEW6 464 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ANKRD61A6NGH8 418 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FAM90A9PA6NNJ1 464 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SYCE1LA8MT33 242 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 FAM90A5PA8MXJ8 464 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 NPIPB11E5RHQ5 1161 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 STX16-NPEPL1H3BU86 382 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 STX16O14662 325 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 SURF4O15260 269 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF500O60304 480 aaPredicted RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 GLRA3O75311 464 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 CDK2AP2O75956 126 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 KRT33AO76009 404 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 RAB36O95755 333 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 PTBP3O95758 552 aaKnown RBP1.79□□□□□ -2.12
PTCH1-223ENST00000551623 CLIC3O95833 236 aa1.79□□□□□ -2.12
PTCH1-223ENST00000551623 ECDO95905 644 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms