RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 COL21A1Q96P44 957 aa1.85□□□□□ -2.11
GPN3-209ENST00000551079 TIMM17AQ99595 171 aa1.85□□□□□ -2.11
GPN3-209ENST00000551079 LSM7Q9UK45 103 aaKnown RBP1.85□□□□□ -2.11
GPN3-209ENST00000551079 ST3GAL6Q9Y274 331 aa1.85□□□□□ -2.11
GPN3-209ENST00000551079 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
GPN3-209ENST00000551079 CLPXO76031 633 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 CLIC3O95833 236 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 NDUFB10O96000 172 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 HLA-DQB1P01920 261 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 ZNF688P0C7X2 276 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 OR5H8P0DN80 308 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 ZNF250P15622 560 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 GDI2P50395 445 aaKnown RBP1.84□□□□□ -2.11
GPN3-209ENST00000551079 RPS11P62280 158 aaKnown RBP eCLIP1.84□□□□□ -2.11
GPN3-209ENST00000551079 SLC25A11Q02978 314 aaKnown RBP1.84□□□□□ -2.11
GPN3-209ENST00000551079 ZMYND11Q15326 602 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 VPS26BQ4G0F5 336 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 SLC16A13Q7RTY0 426 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 SNX20Q7Z614 316 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 SPATA4Q8NEY3 305 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 B3GNT7Q8NFL0 401 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 SHC3Q92529 594 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 OR52D1Q9H346 318 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 KCNE3Q9Y6H6 103 aa1.84□□□□□ -2.11
GPN3-209ENST00000551079 CAMTA1Q9Y6Y1 1673 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 GLYATL1P3A0A0U1RQE8 302 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 A0A1B0GW55 424 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 ZNF878C9JN71 531 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 H0YJW9 148 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 POLR1CO15160 346 aaPredicted RBP1.83□□□□□ -2.12
GPN3-209ENST00000551079 CST1P01037 141 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 DUX4L2P0CJ85 424 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 DUX4L3P0CJ86 424 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 DUX4L5P0CJ88 424 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 DUX4L6P0CJ89 424 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 DUX4L7P0CJ90 424 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 SLC2A3P11169 496 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 NCF2P19878 526 aaPredicted RBP1.83□□□□□ -2.12
GPN3-209ENST00000551079 FOXN2P32314 431 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 GPX4P36969 197 aaPredicted RBP1.83□□□□□ -2.12
GPN3-209ENST00000551079 NSG1P42857 185 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 UBE2NP61088 152 aaKnown RBP1.83□□□□□ -2.12
GPN3-209ENST00000551079 ADARB1P78563 741 aaKnown RBP1.83□□□□□ -2.12
GPN3-209ENST00000551079 CDH17Q12864 832 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 PRAMEF5Q5TYX0 476 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 PRAMEF6Q5VXH4 476 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 CASP12Q6UXS9 341 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 Q6ZSR3 168 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 NIPA1Q7RTP0 329 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 UBE2J2Q8N2K1 259 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 ZNF664Q8N3J9 261 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 FBXL13Q8NEE6 735 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 DNAJC1Q96KC8 554 aaKnown RBP1.83□□□□□ -2.12
GPN3-209ENST00000551079 LZTS2Q9BRK4 669 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 GCOM2Q9BZD3 368 aaPredicted RBP1.83□□□□□ -2.12
GPN3-209ENST00000551079 DUX4Q9UBX2 424 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 STARD10Q9Y365 291 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 CBY1Q9Y3M2 126 aa1.83□□□□□ -2.12
GPN3-209ENST00000551079 MUC6Q6W4X9 2439 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 CEACAM3P40198 252 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 RND2P52198 227 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 FUT5Q11128 374 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 QPRTQ15274 297 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 AVPI1Q5T686 147 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 CERS6Q6ZMG9 384 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 METTL13Q8N6R0 699 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 ARL6IP6Q8N6S5 226 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 NECAB1Q8N987 351 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 SPANXA2-OT1Q8N9U9 137 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 OR5M1Q8NGP8 315 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 OR2A1Q8NGT9 310 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 OR6N1Q8NGY5 312 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 ZNF502Q8TBZ5 544 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 CCDC126Q96EE4 140 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 ATP5SQ99766 215 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 ILKAPQ9H0C8 392 aaPredicted RBP1.82□□□□□ -2.12
GPN3-209ENST00000551079 FGF20Q9NP95 211 aaPredicted RBP1.82□□□□□ -2.12
GPN3-209ENST00000551079 SLC2A8Q9NY64 477 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 CSDC2Q9Y534 153 aaKnown RBP1.82□□□□□ -2.12
GPN3-209ENST00000551079 AKNAQ7Z591 1439 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 ATAD2BQ9ULI0 1458 aa1.82□□□□□ -2.12
GPN3-209ENST00000551079 A0A1W2PNN7 141 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 OR6C74A6NCV1 312 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 CHST10O43529 356 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 SERPINA3P01011 423 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 IGLV6-57P01721 117 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 CD3GP09693 182 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 OR8U9P0C7N5 309 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 RAB3AP20336 220 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 HNRNPH3P31942 346 aaKnown RBP1.81□□□□□ -2.12
GPN3-209ENST00000551079 VSX2P58304 361 aaPredicted RBP1.81□□□□□ -2.12
GPN3-209ENST00000551079 PRKCDQ05655 676 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 OR7A5Q15622 319 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 SSX2Q16385 188 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 TMEM107Q6UX40 140 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 TMEM256Q8N2U0 113 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 ZNF680Q8NEM1 530 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 OR9K2Q8NGE7 335 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 OR13C2Q8NGS9 318 aa1.81□□□□□ -2.12
GPN3-209ENST00000551079 SLC7A13Q8TCU3 470 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms