RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 IPCEF1Q8WWN9 437 aaPredicted RBP13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 C4orf45Q96LM5 186 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 COQ7Q99807 217 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 REG4Q9BYZ8 158 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 NMNAT2Q9BZQ4 307 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 TBCCD1Q9NVR7 557 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 SLCO1C1Q9NYB5 712 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 DUSP13Q9UII6 198 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 GPR160Q9UJ42 338 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 FZR1Q9UM11 496 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 ABCA2Q9BZC7 2435 aa13.23□□□□□ -0.29
PRPF40B-211ENST00000551063 IGHV4-30-2A0A087WSY4 118 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 NDUFS8O00217 210 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 RER1O15258 196 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 ABHD16AO95870 558 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 ADRA2AP08913 450 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 TUBG1P23258 451 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 FASP25445 335 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 PDLIM4P50479 330 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 MOGQ16653 247 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 SLC18B1Q6NT16 456 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 SLC27A4Q6P1M0 643 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 ICA1LQ8NDH6 482 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 OR1F12Q8NHA8 337 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 OR5K1Q8NHB7 308 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 ABHD4Q8TB40 342 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 FAM168AQ92567 244 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 DCLRE1CQ96SD1 692 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 TUBG2Q9NRH3 451 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 MRPL22Q9NWU5 206 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 MYEF2Q9P2K5 600 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 AP4S1Q9Y587 144 aa13.22□□□□□ -0.29
PRPF40B-211ENST00000551063 RTTNQ86VV8 2226 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 CSPG4Q6UVK1 2322 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 RNF223E7ERA6 249 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 SMAD7O15105 426 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 LY6HO94772 140 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 LY6G6DO95868 133 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 CLPTM1O96005 669 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 IGHV3-13P01766 116 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 GCH1P30793 250 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 GGT2P36268 569 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 ALDH3B1P43353 468 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 BLVRAP53004 296 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 PPP1CBP62140 327 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 NKPD1Q17RQ9 610 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 ZNF718Q3SXZ3 478 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 ELFN2Q5R3F8 820 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 MBNL2Q5VZF2 373 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 FAHD1Q6P587 224 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 HIPK1Q86Z02 1210 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 PARP8Q8N3A8 854 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 IQCF1Q8N6M8 205 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 OR9Q1Q8NGQ5 310 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 SLC25A40Q8TBP6 338 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 SNX33Q8WV41 574 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 MARS2Q96GW9 593 aaKnown RBP13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 COG8Q96MW5 612 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 CDADC1Q9BWV3 514 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 TAAR3PQ9P1P4 343 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 KIF17Q9P2E2 1029 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 CGGBP1Q9UFW8 167 aaPredicted RBP13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 CYB5R1Q9UHQ9 305 aa13.21□□□□□ -0.29
PRPF40B-211ENST00000551063 A0A096LNT2 108 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 MT-ND5P03915 603 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 ZNF823P16415 610 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 SPI1P17947 270 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 PRKACGP22612 351 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 POU1F1P28069 291 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 PYCR1P32322 319 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 RGS6P49758 472 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 ACTR3P61158 418 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 DBPQ10586 325 aaPredicted RBP13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 MAD2L1BPQ15013 274 aaPredicted RBP13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 LINC00346Q8IVM7 164 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 OR2AJ1Q8NGZ0 328 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 KLF14Q8TD94 323 aaPredicted RBP13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 PIMREGQ9BSJ6 248 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 TEX12Q9BXU0 123 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 OR2J1Q9GZK6 312 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 GABARAPL1Q9H0R8 117 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 TPK1Q9H3S4 243 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 SLC25A19Q9HC21 320 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 COMMD3-BMI1R4GMX3 469 aa13.2□□□□□ -0.3
PRPF40B-211ENST00000551063 C17orf100A8MU93 164 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 NGFP01138 241 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 HMGN1P05114 100 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 DAOP14920 347 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 PAICSP22234 425 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 FMO3P31513 532 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 ECH1Q13011 328 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 GINS1Q14691 196 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
PRPF40B-211ENST00000551063 SPATA46Q5T0L3 261 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms