RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MS4A2Q01362 244 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 SCRN3Q0VDG4 424 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 KRTAP27-1Q3LI81 207 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 ZNF362Q5T0B9 420 aaPredicted RBP11.05□□□□□ -0.64
NPAS3-209ENST00000551008 AVPI1Q5T686 147 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 TMEM154Q6P9G4 183 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 C16orf89Q6UX73 402 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 SLC26A10Q8NG04 563 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 OR8D4Q8NGM9 314 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 SNX33Q8WV41 574 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 ZNRF4Q8WWF5 429 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 ERMAPQ96PL5 475 aaPredicted RBP11.05□□□□□ -0.64
NPAS3-209ENST00000551008 NMNAT3Q96T66 252 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 WACQ9BTA9 647 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 PLA2G12AQ9BZM1 189 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 FN3KQ9H479 309 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 RERGLQ9H628 205 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 MSL2Q9HCI7 577 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 TBCCD1Q9NVR7 557 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 ACTR3BQ9P1U1 418 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 EIF3KQ9UBQ5 218 aaKnown RBP11.05□□□□□ -0.64
NPAS3-209ENST00000551008 NDRG4Q9ULP0 352 aaKnown RBP11.05□□□□□ -0.64
NPAS3-209ENST00000551008 B9D1Q9UPM9 204 aa11.05□□□□□ -0.64
NPAS3-209ENST00000551008 OR6C68A6NDL8 312 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 B2RBV5 119 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 OR10H3O60404 316 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 GMNNO75496 209 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 ABHD16AO95870 558 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 TFP02787 698 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 CD55P08174 381 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 SRD5A1P18405 259 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 GCH1P30793 250 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 SLC6A6P31641 620 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 RPS6KA3P51812 740 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 DVL1P1P54792 670 aaPredicted RBP11.04□□□□□ -0.64
NPAS3-209ENST00000551008 SMIM11AP58511 58 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 SELENOVP59797 346 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 PPP1R8Q12972 351 aaKnown RBP11.04□□□□□ -0.64
NPAS3-209ENST00000551008 TSPAN31Q12999 210 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 SPATS1Q496A3 300 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 FAM209AQ5JX71 171 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 LCN8Q6JVE9 175 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 LEG1Q6P5S2 330 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 CORO6Q6QEF8 472 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 C1orf229Q6ZS94 237 aaPredicted RBP11.04□□□□□ -0.64
NPAS3-209ENST00000551008 ZBTB46Q86UZ6 589 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 NPEPL1Q8NDH3 523 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 OR4K13Q8NH42 304 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 OR1F12Q8NHA8 337 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 SPATA3Q8NHX4 192 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 EGLN3Q9H6Z9 239 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 SAP30LQ9HAJ7 183 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 ELOVL3Q9HB03 270 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 MRPL22Q9NWU5 206 aaKnown RBP11.04□□□□□ -0.64
NPAS3-209ENST00000551008 PLEK2Q9NYT0 353 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 GPR160Q9UJ42 338 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 PURGQ9UJV8 347 aaKnown RBP11.04□□□□□ -0.64
NPAS3-209ENST00000551008 WIPI2Q9Y4P8 454 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 FBN3Q75N90 2809 aa11.04□□□□□ -0.64
NPAS3-209ENST00000551008 RNF212BA8MTL3 300 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 BHLHE40O14503 412 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 IFNA2P01563 188 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 KITLGP21583 273 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 THBS2P35442 1172 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 GGT2P36268 569 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 GUCA1AP43080 201 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-209ENST00000551008 MVKQ03426 396 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 COX10Q12887 443 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 CDK5R2Q13319 367 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 LYPD4Q6UWN0 246 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 CFAP77Q6ZQR2 320 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-209ENST00000551008 SDR9C7Q8NEX9 313 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 NDEL1Q9GZM8 345 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 LPAR2Q9HBW0 351 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 PNRC2Q9NPJ4 139 aaKnown RBP11.03□□□□□ -0.64
NPAS3-209ENST00000551008 RPRD1BQ9NQG5 326 aaKnown RBP11.03□□□□□ -0.64
NPAS3-209ENST00000551008 FAM53CQ9NYF3 392 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 ATPIF1Q9UII2 106 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 DOCK11Q5JSL3 2073 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 ANK2Q01484 3957 aa11.03□□□□□ -0.64
NPAS3-209ENST00000551008 B4DSR2 109 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 FAM107AO95990 144 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 AVPP01185 164 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 IGHV2-5P01817 119 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 MSMBP08118 114 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 MXRA7P84157 204 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 HLXQ14774 488 aaPredicted RBP11.02□□□□□ -0.65
NPAS3-209ENST00000551008 MTX3Q5HYI7 312 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 SLC35F1Q5T1Q4 408 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 SLC18B1Q6NT16 456 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 LINC00346Q8IVM7 164 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 OR10S1Q8NGN2 331 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 GNPDA2Q8TDQ7 276 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 MCUR1Q96AQ8 359 aa11.02□□□□□ -0.65
NPAS3-209ENST00000551008 HAVCR1Q96D42 359 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms