RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PPIAL4DF5H284 164 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 H7C1C5 153 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 PLPP2O43688 288 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 IDH3BO43837 385 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 DEAF1O75398 565 aaPredicted RBP9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 IGHV2-5P01817 119 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 PPIAL4FP0DN26 164 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 RAC2P15153 192 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 CTLA4P16410 223 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 LCN6P62502 163 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 PSG7Q13046 419 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 RFX4Q33E94 735 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 SLC36A3Q495N2 470 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 SAMD4BQ5PRF9 694 aaKnown RBP9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 AVPI1Q5T686 147 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 SMARCD3Q6STE5 483 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 USP43Q70EL4 1123 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 VASH1Q7L8A9 365 aaPredicted RBP9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 TSEN54Q7Z6J9 526 aaKnown RBP9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 MEX3DQ86XN8 651 aaKnown RBP9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 SPICQ8N5J4 248 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 OR1F12Q8NHA8 337 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 ST7LQ8TDW4 575 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 RASD2Q96D21 266 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 HAVCR1Q96D42 359 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 CMBLQ96DG6 245 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 PYURFQ96I23 114 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 DHRS1Q96LJ7 313 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 HDHD2Q9H0R4 259 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 SYT4Q9H2B2 425 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 EMC7Q9NPA0 242 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 G6PC2Q9NQR9 355 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 ASH2LQ9UBL3 628 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 IL19Q9UHD0 177 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 EGFL7Q9UHF1 273 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 PURGQ9UJV8 347 aaKnown RBP9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 COA3Q9Y2R0 106 aaPredicted RBP9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 POLR1DQ9Y2S0 133 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 IER3IP1Q9Y5U9 82 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 NPTNQ9Y639 398 aa9.23□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZSCAN5BA6NJL1 495 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 SOCS2O14508 198 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 ARPC3O15145 178 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 SNX3O60493 162 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 FOXH1O75593 365 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 GADD45GO95257 159 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 RENP00797 406 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 HSD17B1P14061 328 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 ZNF26P17031 533 aaPredicted RBP9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 FUT4P22083 530 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 SLC6A6P31641 620 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 MNAT1P51948 309 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 ECH1Q13011 328 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 TMEM155Q4W5P6 130 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 DCAF12L2Q5VW00 463 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 JAZF1Q86VZ6 243 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 PGAM4Q8N0Y7 254 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 KLHL36Q8N4N3 616 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 LINC00471Q8N535 108 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 NANPQ8TBE9 248 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 GTF3AQ92664 365 aaKnown RBP9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 COQ7Q99807 217 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 NUAK2Q9H093 628 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 RERGLQ9H628 205 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 MSL2Q9HCI7 577 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 TMEM106BQ9NUM4 274 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 TMCC3Q9ULS5 477 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 PCDHB10Q9UN67 800 aa9.22□□□□□ -0.93
VTI1BP3-201ENST00000550220 TRBV4-1A0A0J9YWV2 114 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 ISPDA4D126 451 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 TRIM77I1YAP6 450 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR10H3O60404 316 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 KRT36O76013 467 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 SCG5P05408 212 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 SELEP16581 610 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 FPR3P25089 353 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 FPR2P25090 351 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 NOS3P29474 1203 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 CENPAP49450 140 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 RPL13AP3Q6NVV1 102 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 C16orf89Q6UX73 402 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZNF283Q8N7M2 679 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR2Z1Q8NG97 314 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR13G1Q8NGZ3 307 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 OR52J3Q8NH60 311 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 POP5Q969H6 163 aaKnown RBP9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 NSMCE2Q96MF7 247 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 ZNF582Q96NG8 517 aaPredicted RBP9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 ERMAPQ96PL5 475 aaPredicted RBP9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 CDADC1Q9BWV3 514 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 SUCNR1Q9BXA5 334 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 C7orf69Q9H7B7 122 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 PPP1R3CQ9UQK1 317 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 STARD10Q9Y365 291 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 CACNG2Q9Y698 323 aa9.21□□□□□ -0.94
VTI1BP3-201ENST00000550220 RER1O15258 196 aa9.2□□□□□ -0.94
VTI1BP3-201ENST00000550220 FABP3P05413 133 aa9.2□□□□□ -0.94
VTI1BP3-201ENST00000550220 SBK2P0C263 348 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms