RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PCDHB10Q9UN67 800 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 NPTNQ9Y639 398 aa14.69□□□□□ -0.06
CHMP1A-205ENST00000548650 TRBV4-1A0A0J9YWV2 114 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 PTP4A3O75365 173 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 TUBG1P23258 451 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 CFPP27918 469 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 ACTG1P63261 375 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 SEC23BQ15437 767 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 FGD3Q5JSP0 725 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 GPR139Q6DWJ6 353 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 PTCHD4Q6ZW05 846 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 RRM2BQ7LG56 351 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 PEG10Q86TG7 708 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 GLB1L2Q8IW92 636 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 ZNF283Q8N7M2 679 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 FAM86B1Q8N7N1 296 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 SIGLEC11Q96RL6 698 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 TUBG2Q9NRH3 451 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 IL20RAQ9UHF4 553 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 RPS6KA6Q9UK32 745 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 STARD10Q9Y365 291 aa14.68□□□□□ -0.06
CHMP1A-205ENST00000548650 PPIAL4EA0A075B759 164 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 PPIAL4CA0A0B4J2A2 164 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 PPIAL4DF5H284 164 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 SOCS2O14508 198 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 NDUFAB1O14561 156 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 SLC16A7O60669 478 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 KHDRBS3O75525 346 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 PPIAL4FP0DN26 164 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 ZFP36P26651 326 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 MDH1P40925 334 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 COMPP49747 757 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 LSM6P62312 80 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 CCDC92Q53HC0 331 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 OR2Z1Q8NG97 314 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 NANPQ8TBE9 248 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 ST7LQ8TDW4 575 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 FAM216AQ8WUB2 273 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 C7orf34Q96L11 122 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 DHRS1Q96LJ7 313 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 SAMD8Q96LT4 415 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 FUZQ9BT04 418 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 C7orf69Q9H7B7 122 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 EGFL7Q9UHF1 273 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 ATPIF1Q9UII2 106 aa14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 COA3Q9Y2R0 106 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-205ENST00000548650 TRIM77I1YAP6 450 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 FOXH1O75593 365 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 TXNDC12O95881 172 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 DBHP09172 617 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 RHCEP18577 417 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 TNFRSF1AP19438 455 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 TNFSF4P23510 183 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 MMP16P51512 607 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 PSME3P61289 254 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 ZMYND11Q15326 602 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 TMEM155Q4W5P6 130 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 C1orf94Q6P1W5 598 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 SPICQ8N5J4 248 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 DEFB108BQ8NET1 73 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 OR1F12Q8NHA8 337 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 ITLN1Q8WWA0 313 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 HAVCR1Q96D42 359 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 CMBLQ96DG6 245 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 COG8Q96MW5 612 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 DCLRE1CQ96SD1 692 aaKnown RBP14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 GPA33Q99795 319 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 SUCNR1Q9BXA5 334 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 NUAK2Q9H093 628 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 MYLK2Q9H1R3 596 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 RERGLQ9H628 205 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 SPAG4Q9NPE6 437 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 ESM1Q9NQ30 184 aa14.66□□□□□ -0.06
CHMP1A-205ENST00000548650 TMEM89A2RUT3 159 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 UNC119BA6NIH7 251 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 F5H0A9 414 aaPredicted RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 J3QW42 95 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 DCTN6O00399 190 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 RER1O15258 196 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 DIRAS1O95057 198 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 GPANK1O95872 356 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 RAC2P15153 192 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 SEC61A1P61619 476 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 BTG1P62324 171 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 KCNMB1Q16558 191 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 DPY19L2P2Q6ZN68 376 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 BPIFB2Q8N4F0 458 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 TSSK2Q96PF2 358 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 OR2V2Q96R30 315 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 JMJD8Q96S16 334 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 RBM4Q9BWF3 364 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 PATZ1Q9HBE1 687 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 MED4Q9NPJ6 270 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 MMP26Q9NRE1 261 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 DCAF13Q9NV06 445 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 IL19Q9UHD0 177 aa14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 SAMD4AQ9UPU9 718 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 POLR3KQ9Y2Y1 108 aaPredicted RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 FAM32AQ9Y421 112 aaKnown RBP14.65□□□□□ -0.06
CHMP1A-205ENST00000548650 IER3IP1Q9Y5U9 82 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms