RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 C17orf78Q8N4C9 275 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 ZNF485Q8NCK3 441 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 OR10S1Q8NGN2 331 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 FGFBP3Q8TAT2 258 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 PNRC2Q9NPJ4 139 aaKnown RBP25.15■■□□□ 1.62
BRF1-213ENST00000548421 SLCO1C1Q9NYB5 712 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 MRM2Q9UI43 246 aaKnown RBP25.15■■□□□ 1.62
BRF1-213ENST00000548421 ERRFI1Q9UJM3 462 aaPredicted RBP25.15■■□□□ 1.62
BRF1-213ENST00000548421 METTL15A6NJ78 407 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 ZNF878C9JN71 531 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 PATE4P0C8F1 98 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 JUNBP17275 347 aaPredicted RBP25.15■■□□□ 1.62
BRF1-213ENST00000548421 PSMB1P20618 241 aaKnown RBP25.15■■□□□ 1.62
BRF1-213ENST00000548421 HOXC12P31275 282 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 DEGS2Q6QHC5 323 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 STAC2Q6ZMT1 411 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 HDHD5Q9BXW7 423 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 RNF121Q9H920 327 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 CENPMQ9NSP4 180 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 PLEK2Q9NYT0 353 aa25.15■■□□□ 1.62
BRF1-213ENST00000548421 SGCEO43556 437 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 HLA-HP01893 362 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 TFAP2AP05549 437 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 TACSTD2P09758 323 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 IL32P24001 234 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 OPRL1P41146 370 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 UBE2NP61088 152 aaKnown RBP25.14■■□□□ 1.61
BRF1-213ENST00000548421 CCDC92Q53HC0 331 aaPredicted RBP25.14■■□□□ 1.61
BRF1-213ENST00000548421 YIPF7Q8N8F6 280 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 MUL1Q969V5 352 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 OR2H1Q9GZK4 316 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 SLC5A6Q9Y289 635 aa25.14■■□□□ 1.61
BRF1-213ENST00000548421 DIDO1Q9BTC0 2240 aaKnown RBP25.13■■□□□ 1.61
BRF1-213ENST00000548421 ZNF254O75437 659 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 ABHD16AO95870 558 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 H2BFMP0C1H6 154 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 CD79AP11912 226 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 ARR3P36575 388 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 PSG4Q00888 419 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 RAB35Q15286 201 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 ELFN2Q5R3F8 820 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 TMEM53Q6P2H8 277 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 VASH1Q7L8A9 365 aaPredicted RBP25.13■■□□□ 1.61
BRF1-213ENST00000548421 HDHD2Q9H0R4 259 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 ELOVL3Q9HB03 270 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 SLC17A5Q9NRA2 495 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 DDX28Q9NUL7 540 aaKnown RBP25.13■■□□□ 1.61
BRF1-213ENST00000548421 ACOXLQ9NUZ1 547 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 LRP12Q9Y561 859 aa25.13■■□□□ 1.61
BRF1-213ENST00000548421 ARPC4-TTLL3A0A0A6YYG9 625 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 ZNF503-AS2A6NEH8 195 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 INMTO95050 263 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 ASCL1P50553 236 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 RIDAP52758 137 aaKnown RBP25.12■■□□□ 1.61
BRF1-213ENST00000548421 KLBQ86Z14 1044 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 PELI1Q96FA3 418 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 COG8Q96MW5 612 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 ATF6BQ99941 703 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 WNT5BQ9H1J7 359 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 BABAM2Q9NXR7 383 aa25.12■■□□□ 1.61
BRF1-213ENST00000548421 DOK2O60496 412 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 HSMCR30P0CW71 290 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 PSMB9P28065 219 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 RPL5P46777 297 aaKnown RBP25.11■■□□□ 1.61
BRF1-213ENST00000548421 RAB1AP62820 205 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 TUBA1BP68363 451 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 BLMHQ13867 455 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 DOC2BQ14184 412 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 TAF13Q15543 124 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 TIGD6Q17RP2 521 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 GSG1Q2KHT4 349 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 SYT6Q5T7P8 510 aaPredicted RBP25.11■■□□□ 1.61
BRF1-213ENST00000548421 LIPNQ5VXI9 398 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 ZNF774Q6NX45 483 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 TUBA1AQ71U36 451 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 HIST2H2ABQ8IUE6 130 aaPredicted RBP25.11■■□□□ 1.61
BRF1-213ENST00000548421 LILRB4Q8NHJ6 448 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 MGLLQ99685 303 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 OBP2BQ9NPH6 170 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 TRIM36Q9NQ86 728 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 B3GNT2Q9NY97 397 aa25.11■■□□□ 1.61
BRF1-213ENST00000548421 OR5H1A6NKK0 313 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 GRB2P62993 217 aaKnown RBP25.1■■□□□ 1.61
BRF1-213ENST00000548421 ACSM1Q08AH1 577 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 FAM27E3Q08E93 113 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 MRPL28Q13084 256 aaKnown RBP25.1■■□□□ 1.61
BRF1-213ENST00000548421 PABPC1L2AQ5JQF8 200 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 ALDH16A1Q8IZ83 802 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 STEAP2Q8NFT2 490 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 AKR7LQ8NHP1 331 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 HAVCR2Q8TDQ0 301 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 NOX3Q9HBY0 568 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 ISYNA1Q9NPH2 558 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 ZNF462Q96JM2 2506 aa25.1■■□□□ 1.61
BRF1-213ENST00000548421 SYNGR3O43761 229 aa25.09■■□□□ 1.61
BRF1-213ENST00000548421 LALBAP00709 142 aa25.09■■□□□ 1.61
BRF1-213ENST00000548421 ALDH3B2P48448 385 aa25.09■■□□□ 1.61
BRF1-213ENST00000548421 GBX2P52951 348 aaPredicted RBP25.09■■□□□ 1.61
BRF1-213ENST00000548421 ECH1Q13011 328 aa25.09■■□□□ 1.61
BRF1-213ENST00000548421 MLLT11Q13015 90 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms