RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 FAM208BQ5VWN6 2430 aa2.83□□□□□ -1.96
PTCH1-216ENST00000548379 MIA3Q5JRA6 1907 aa2.83□□□□□ -1.96
PTCH1-216ENST00000548379 TICRRQ7Z2Z1 1910 aa2.83□□□□□ -1.96
PTCH1-216ENST00000548379 CEP295Q9C0D2 2601 aa2.83□□□□□ -1.96
PTCH1-216ENST00000548379 TPRP12270 2363 aaKnown RBP2.82□□□□□ -1.96
PTCH1-216ENST00000548379 PKD1L2Q7Z442 2459 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 A0A1W2PPE3 182 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 PSMB11A5LHX3 300 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 GOLGA8OA6NCC3 632 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF716A6NP11 495 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 D6RAR5 112 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 GOLGA8NF8WBI6 632 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 KRTAP4-16G5E9R7 235 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-216ENST00000548379 MKRN2OSH3BPM6 223 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 GFYI3L273 518 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF780AO75290 641 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-216ENST00000548379 CIB2O75838 187 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 ATP5LO75964 103 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 DIRAS1O95057 198 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 SERPINA3P01011 423 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 TNFP01375 233 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF735P0CB33 412 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 RBMY1CP0DJD4 496 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 GIMD1P0DJR0 217 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 HTR1FP30939 366 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 SYKP43405 635 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 KIR2DS4P43632 304 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 STX17P56962 302 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 PFN3P60673 137 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 RPL23AP62750 156 aaKnown RBP2.82□□□□□ -1.96
PTCH1-216ENST00000548379 GNB2P62879 340 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 CCL7P80098 99 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 IGFBP7Q16270 282 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 DUSP7Q16829 419 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 KLHL38Q2WGJ6 581 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 PHYHD1Q5SRE7 291 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 CASC10Q5T4H9 136 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 RESP18Q5W5W9 173 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 C22orf39Q6P5X5 142 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 TGIF2LYQ8IUE0 185 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 C11orf53Q8IXP5 236 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF100Q8IYN0 542 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 RDH10Q8IZV5 341 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 FAM83FQ8NEG4 500 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-216ENST00000548379 RAPGEF5Q92565 580 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 C10orf35Q96D05 121 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 NUS1Q96E22 293 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 BMFQ96LC9 184 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 RNF2Q99496 336 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 HIST1H4GQ99525 98 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 EBF4Q9BQW3 602 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 GPR61Q9BZJ8 451 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 C20orf85Q9H1P6 137 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 REEP4Q9H6H4 257 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 METTL7AQ9H8H3 244 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 GLRX2Q9NS18 164 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF639Q9UID6 485 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 VANGL2Q9ULK5 521 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 STAP1Q9ULZ2 295 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 COPS3Q9UNS2 423 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 PIGLQ9Y2B2 252 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF256Q9Y2P7 627 aaPredicted RBP2.82□□□□□ -1.96
PTCH1-216ENST00000548379 FADS3Q9Y5Q0 445 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 U3KQA8 63 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 MAP1BP46821 2468 aaKnown RBP2.82□□□□□ -1.96
PTCH1-216ENST00000548379 FRYQ5TBA9 3013 aa2.82□□□□□ -1.96
PTCH1-216ENST00000548379 FANCMQ8IYD8 2048 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 IGHV3OR16-13A0A075B7E8 117 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 CXorf51AA0A1B0GTR3 108 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 GOLGA6L4A6NEF3 574 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 HELTA6NFD8 242 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 PCP4L1A6NKN8 68 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 C10orf142B7Z368 130 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 H0YC42 278 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 K7ERQ8 282 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 HSD17B6O14756 317 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 RGS16O15492 202 aaPredicted RBP2.81□□□□□ -1.96
PTCH1-216ENST00000548379 KLRC4O43908 158 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 RAD1O60671 282 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 MMP23AO75900 390 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 SMC2O95347 1197 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 CLDN9O95484 217 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 CTSLP07711 333 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 TCN2P20062 427 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 GALP22466 123 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 CMA1P23946 247 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 PPP1R2P41236 205 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 KLK7P49862 253 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 CCNHP51946 323 aaPredicted RBP2.81□□□□□ -1.96
PTCH1-216ENST00000548379 ATP1B3P54709 279 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 PRRX1P54821 245 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 SEC61GP60059 68 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 LRRC63Q05C16 580 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 KLHL40Q2TBA0 621 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 BRMS1LQ5PSV4 323 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 C1orf146Q5VVC0 180 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 SYPL2Q5VXT5 272 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 RWDD4Q6NW29 188 aaKnown RBP2.81□□□□□ -1.96
PTCH1-216ENST00000548379 NANOGNBQ7Z5D8 188 aa2.81□□□□□ -1.96
PTCH1-216ENST00000548379 DEFB106AQ8N104 65 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms