RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 RASD2Q96D21 266 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 RAB39BQ96DA2 213 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 CMBLQ96DG6 245 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 CMTM5Q96DZ9 223 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 ELMOD3Q96FG2 381 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 ZNF570Q96NI8 536 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 GAL3ST1Q99999 423 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 NDEL1Q9GZM8 345 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 MED4Q9NPJ6 270 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 CYSLTR2Q9NS75 346 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 UBAP1Q9NZ09 502 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 NDUFAF4Q9P032 175 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 KLHL21Q9UJP4 597 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 ZDHHC8Q9ULC8 765 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 NDRG4Q9ULP0 352 aaKnown RBP5.69□□□□□ -1.5
SCAF11-211ENST00000547950 AURKCQ9UQB9 309 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 TMEM5Q9Y2B1 443 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 COA3Q9Y2R0 106 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-211ENST00000547950 STARD10Q9Y365 291 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 WIPI2Q9Y4P8 454 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 IER3IP1Q9Y5U9 82 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 ENPP4Q9Y6X5 453 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 V9GYQ6 96 aa5.69□□□□□ -1.5
SCAF11-211ENST00000547950 HEATR1Q9H583 2144 aaKnown RBP5.69□□□□□ -1.5
SCAF11-211ENST00000547950 LOC105371242A0A075B767 164 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 TRAV20A0A0B4J274 112 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 TRBV4-1A0A0J9YWV2 114 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 A0A1W2PRQ8 180 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 UNC119BA6NIH7 251 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 SGCEO43556 437 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 AHCYL1O43865 530 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 DOK2O60496 412 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 DEAF1O75398 565 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 KHDRBS3O75525 346 aaKnown RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 UBOX5O94941 541 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 VENTXO95231 258 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 GPANK1O95872 356 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 PNPP00491 289 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 GHRHP01286 108 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 COX5BP10606 129 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 CTLA4P16410 223 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 RHCEP18577 417 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 GSTM3P21266 225 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 MSX2P35548 267 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 CDKN2AP42771 156 aaKnown RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 OMPP47874 163 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 LCN2P80188 198 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 TNFAIP6P98066 277 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 SCRN3Q0VDG4 424 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 DBPQ10586 325 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 CDK5R2Q13319 367 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 KRR1Q13601 381 aaKnown RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 DGCR6Q14129 220 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 SEC23BQ15437 767 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 MESTQ5EB52 335 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 MTX3Q5HYI7 312 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 GPR139Q6DWJ6 353 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 CPLX4Q7Z7G2 160 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 GLB1L2Q8IW92 636 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 C1orf174Q8IYL3 243 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 FAM86B1Q8N7N1 296 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 ATG16L2Q8NAA4 619 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 FAM156AQ8NDB6 213 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 OR2Z1Q8NG97 314 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 MEGF10Q96KG7 1140 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 C7orf34Q96L11 122 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 ERMAPQ96PL5 475 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 GPA33Q99795 319 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 WACQ9BTA9 647 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 NUAK2Q9H093 628 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 SYT4Q9H2B2 425 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 POFUT1Q9H488 388 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 ANKRD19PQ9H560 264 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 SRA1Q9HD15 236 aaKnown RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 NRIP3Q9NQ35 241 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 DCAF13Q9NV06 445 aaKnown RBP5.68□□□□□ -1.5
SCAF11-211ENST00000547950 TBCCD1Q9NVR7 557 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 DCAF16Q9NXF7 216 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 PLEK2Q9NYT0 353 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 ASH2LQ9UBL3 628 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 PCDHB10Q9UN67 800 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 SIGLEC7Q9Y286 467 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 RTTNQ86VV8 2226 aa5.68□□□□□ -1.5
SCAF11-211ENST00000547950 ARFGEF3Q5TH69 2177 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 A0A0G2JMP0 313 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 A0A0X1KG70 313 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 RER1O15258 196 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 ALX3O95076 343 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 PPP1R3DO95685 299 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 IGHV2-5P01817 119 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 DBHP09172 617 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 ADRA2CP18825 462 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 TNFSF4P23510 183 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 SDHAP31040 664 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 LIMS1P48059 325 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 ERFP50548 548 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
SCAF11-211ENST00000547950 LSM6P62312 80 aaKnown RBP5.67□□□□□ -1.5
SCAF11-211ENST00000547950 SLC3A1Q07837 685 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms