RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 COX6A1P12074 109 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 PTGDSP41222 190 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 IL11RAQ14626 422 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 RAB11BQ15907 218 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ISXQ2M1V0 245 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 DNM1P34Q6PK57 102 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 RTN4RL2Q86UN3 420 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ADAMTS14Q8WXS8 1223 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 AKAP1Q92667 903 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 LRFN5Q96NI6 719 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 TMEM138Q9NPI0 162 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 HHLA2Q9UM44 414 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 SIX6O95475 246 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 IGHG1P01857 330 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 HPXP02790 462 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 CD53P19397 219 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ITGA3P26006 1051 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 SLC6A1P30531 599 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ANGPT1Q15389 498 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 OR2Y1Q8NGV0 311 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ASB5Q8WWX0 329 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 TTC9Q92623 222 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 ALKBH4Q9NXW9 302 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 B3GAT1Q9P2W7 334 aa11.33□□□□□ -0.6
SCAF11-209ENST00000547018 CADP27708 2225 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 PNLIPP16233 465 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 GALP22466 123 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 CCNOP22674 350 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 PTH2RP49190 550 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 RRAS2P62070 204 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-209ENST00000547018 EGR3Q06889 387 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 Q5BKY6 102 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 ATP1A1-AS1Q5TC04 95 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 OPN5Q6U736 354 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 ZNF782Q6ZMW2 699 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-209ENST00000547018 CD163Q86VB7 1156 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-209ENST00000547018 DTWD2Q8NBA8 298 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 RNF128Q8TEB7 428 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 MCHR2Q969V1 340 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 MRGPRX4Q96LA9 322 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-209ENST00000547018 KCNJ15Q99712 375 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 STMN3Q9NZ72 180 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 GDF2Q9UK05 429 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-209ENST00000547018 FOXJ3Q9UPW0 622 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 HTR3EA5X5Y0 456 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 FAM166BA8MTA8 275 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 GPR171O14626 319 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 P04436 131 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 DBHP09172 617 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 BTCP35070 178 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 SELENOPP49908 381 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 TGIF1Q15583 401 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 LRRTM1Q86UE6 522 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 ALKBH3Q96Q83 286 aaPredicted RBP11.32□□□□□ -0.6
SCAF11-209ENST00000547018 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 BANF2Q9H503 90 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 HRASLSQ9HDD0 168 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 B3GALT5Q9Y2C3 310 aa11.32□□□□□ -0.6
SCAF11-209ENST00000547018 A6NIZ1 184 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 ALDOBP05062 364 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 FGF5P12034 268 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 RAD52P43351 418 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 RAP1BP61224 184 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 RAP1AP62834 184 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 LYPD8Q6UX82 237 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 UNQ9370/PRO34162Q6UXP9 181 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 VASH2Q86V25 355 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 IL22RA1Q8N6P7 574 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 OR4S1Q8NGB4 309 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 CT55Q8WUE5 264 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 LIN37Q96GY3 246 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-209ENST00000547018 THOC3Q96J01 351 aaKnown RBP11.31□□□□□ -0.6
SCAF11-209ENST00000547018 SFXN2Q96NB2 322 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 CITED4Q96RK1 184 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 MARVELD1Q9BSK0 173 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 OR51J1Q9H342 316 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 PLEKHA1Q9HB21 404 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 DIABLOQ9NR28 239 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 P4HTMQ9NXG6 502 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 FBXO9Q9UK97 447 aaPredicted RBP11.31□□□□□ -0.6
SCAF11-209ENST00000547018 OR5H15A6NDH6 313 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 M0R296 226 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 RBBP9O75884 186 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 HCKP08631 526 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 GDF1P27539 372 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 CCR9P51686 369 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 LINC00303Q3SY05 128 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 MOGAT2Q3SYC2 334 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 OR52N4Q8NGI2 321 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 OR10K1Q8NGX5 313 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 C1orf198Q9H425 327 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 FOXJ2Q9P0K8 574 aa11.31□□□□□ -0.6
SCAF11-209ENST00000547018 STEAP1Q9UHE8 339 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms