RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 HINT3Q9NQE9 182 aaKnown RBP13.6□□□□□ -0.23
DDX54-204ENST00000546898 TBCCD1Q9NVR7 557 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 NKIRAS2Q9NYR9 191 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 POMPQ9Y244 141 aa13.6□□□□□ -0.23
DDX54-204ENST00000546898 TCRBV3S1A0A5B6 114 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 OR6C68A6NDL8 312 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 INAFM1C9JVW0 142 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 GNGT2O14610 69 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 GSC2O15499 205 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 ATP5HO75947 161 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 MPZL1O95297 269 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 NAT2P11245 290 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 HIST1H3AP68431 136 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 MRPS11P82912 194 aaKnown RBP13.59□□□□□ -0.23
DDX54-204ENST00000546898 GGTLC2Q14390 218 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 CCDC92Q53HC0 331 aaPredicted RBP13.59□□□□□ -0.23
DDX54-204ENST00000546898 SLC35F1Q5T1Q4 408 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 HIST2H3PS2Q5TEC6 136 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 HIST2H3AQ71DI3 136 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 LNX2Q8N448 690 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 OR2T33Q8NG76 320 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 OR1F12Q8NHA8 337 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 KLF14Q8TD94 323 aaPredicted RBP13.59□□□□□ -0.23
DDX54-204ENST00000546898 GIPC3Q8TF64 312 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 IPCEF1Q8WWN9 437 aaPredicted RBP13.59□□□□□ -0.23
DDX54-204ENST00000546898 RDH5Q92781 318 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 COQ7Q99807 217 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 TSSK6Q9BXA6 273 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 OR2J1Q9GZK6 312 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 KLHL21Q9UJP4 597 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 LHFPL6Q9Y693 200 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 TANC2Q9HCD6 1990 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
DDX54-204ENST00000546898 MALRD1Q5VYJ5 2156 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 GPANK1O95872 356 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 NGFP01138 241 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 HPXP02790 462 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 ZNF23P17027 643 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 ACHEP22303 614 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 LIPAP38571 399 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 MPV17P39210 176 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 RGS6P49758 472 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 GZMKP49863 264 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 TEKQ02763 1124 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 RIN1Q13671 783 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 MEP1BQ16820 701 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 ALKBH6Q3KRA9 238 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 ELFN2Q5R3F8 820 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 SPATA46Q5T0L3 261 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 C6orf52Q5T4I8 152 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 OR2T4Q8NH00 348 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 DDOQ99489 341 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 CADM1Q9BY67 442 aaKnown RBP13.58□□□□□ -0.24
DDX54-204ENST00000546898 FN3KQ9H479 309 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 CHODLQ9H9P2 273 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 CYSLTR2Q9NS75 346 aa13.58□□□□□ -0.24
DDX54-204ENST00000546898 IGHV4-61A0A0C4DH41 118 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 PLSCR5A0PG75 271 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 RER1O15258 196 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 FKBP6O75344 327 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 NCR1O76036 304 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 SOX14O95416 240 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 TFP02787 698 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 TACSTD2P09758 323 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 IGHV4-31P0DP07 118 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 MMP15P51511 669 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 CBX1P83916 185 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 ZMAT1Q5H9K5 638 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 FAM209AQ5JX71 171 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.57□□□□□ -0.24
DDX54-204ENST00000546898 SLC37A3Q8NCC5 494 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 PAPD5Q8NDF8 572 aaKnown RBP13.57□□□□□ -0.24
DDX54-204ENST00000546898 OR4Q3Q8NH05 313 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 TEX47Q8TBZ9 253 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 FEVQ99581 238 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 NIPSNAP1Q9BPW8 284 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 MMADHCQ9H3L0 296 aaPredicted RBP13.57□□□□□ -0.24
DDX54-204ENST00000546898 YAE1D1Q9NRH1 226 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 ARMC1Q9NVT9 282 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 JMJD1CQ15652 2540 aa13.57□□□□□ -0.24
DDX54-204ENST00000546898 A8MV72 311 aaPredicted RBP13.56□□□□□ -0.24
DDX54-204ENST00000546898 E2F6O75461 281 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 IFNGP01579 166 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 HLA-DQA2P01906 255 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 ADH4P08319 380 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 MAGEB1P43366 347 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 ZNF81P51508 661 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 CHN2P52757 468 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 ZNF362Q5T0B9 420 aaPredicted RBP13.56□□□□□ -0.24
DDX54-204ENST00000546898 CYB5R2Q6BCY4 276 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 SLC18B1Q6NT16 456 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 CYB561A3Q8NBI2 242 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 PROKR2Q8NFJ6 384 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 OR2AJ1Q8NGZ0 328 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 SLC7A6Q92536 515 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 DIRC2Q96SL1 478 aa13.56□□□□□ -0.24
DDX54-204ENST00000546898 RBM4Q9BWF3 364 aaKnown RBP13.56□□□□□ -0.24
DDX54-204ENST00000546898 CDADC1Q9BWV3 514 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms