RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 SLC22A23A1A5C7 686 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 FAM183AA6NL82 134 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 G3V3Y1 287 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 DCTN6O00399 190 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 RNF13O43567 381 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 AKR7A3O95154 331 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 GABARAPO95166 117 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 BCL10O95999 233 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 PTHP01270 115 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 CD1AP06126 327 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 OR2T7P0C7T2 308 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 NR2C1P13056 603 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 HLA-DOBP13765 273 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 CCNA2P20248 432 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 GALP22466 123 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 CRABP1P29762 137 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 POU3F4P49335 361 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 WNT4P56705 351 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 TMPRSS3P57727 454 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SRSF3P84103 164 aaKnown RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 MLLT11Q13015 90 aaPredicted RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 DEFB109BQ30KR1 87 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 TEX30Q5JUR7 227 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 C10orf128Q5T292 105 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 ZNF684Q5T5D7 378 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SHEQ5VZ18 495 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 LEG1Q6P5S2 330 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SLC16A12Q6ZSM3 486 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 CREB3L2Q70SY1 520 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SLC35D2Q76EJ3 337 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 IGFN1Q86VF2 1251 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 OR6V1Q8N148 313 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SYS1Q8N2H4 156 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 FAM98AQ8NCA5 519 aaKnown RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 OR2T4Q8NH00 348 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 OR2T27Q8NH04 317 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 OR4K13Q8NH42 304 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 OR2V1Q8NHB1 315 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 HAVCR2Q8TDQ0 301 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 ZNRF4Q8WWF5 429 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SMPDL3BQ92485 455 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SLC25A36Q96CQ1 311 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 DGCR14Q96DF8 476 aaKnown RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 ZHX1-C8orf76Q96EF9 292 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 RNFT2Q96EX2 444 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 SLC25A44Q96H78 314 aaPredicted RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 JSRP1Q96MG2 331 aaPredicted RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 SFXN2Q96NB2 322 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 OR5B2Q96R09 309 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 CNN2Q99439 309 aaKnown RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 NAA11Q9BSU3 229 aaPredicted RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 SRXN1Q9BYN0 137 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 BCO1Q9HAY6 547 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 AMBNQ9NP70 447 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 NUDT15Q9NV35 164 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 ASB6Q9NWX5 421 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 RHBDL2Q9NX52 303 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 Q9UFV3 132 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 ING1Q9UK53 422 aaPredicted RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 CSAG2Q9Y5P2 127 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 NCOA6Q14686 2063 aaPredicted RBP7.46□□□□□ -1.22
VPS29-203ENST00000546588 MED12LQ86YW9 2145 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 DOCK7Q96N67 2140 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 DNAJC13O75165 2243 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 ZNF407Q9C0G0 2248 aa7.46□□□□□ -1.22
VPS29-203ENST00000546588 MED12Q93074 2177 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 A6NLC8 198 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 EIF4E1BA6NMX2 242 aaKnown RBP7.45□□□□□ -1.22
VPS29-203ENST00000546588 XKRYO14609 159 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 GATCO43716 136 aaKnown RBP7.45□□□□□ -1.22
VPS29-203ENST00000546588 RAMP1O60894 148 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 OR6A2O95222 327 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 CRYZL1O95825 349 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 RENP00797 406 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 TFP02787 698 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 TFPIP10646 304 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ACVR1BP36896 505 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 SLC6A9P48067 706 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 CCL11P51671 97 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 MLLT10P55197 1068 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 CLDN20P56880 219 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 NKX6-1P78426 367 aaPredicted RBP7.45□□□□□ -1.22
VPS29-203ENST00000546588 POU3F1Q03052 451 aaPredicted RBP7.45□□□□□ -1.22
VPS29-203ENST00000546588 PIGFQ07326 219 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 CAMK2DQ13557 499 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 GPR50Q13585 617 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 TPBGQ13641 420 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ZNF169Q14929 603 aaPredicted RBP7.45□□□□□ -1.22
VPS29-203ENST00000546588 PON3Q15166 354 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 ZMYND11Q15326 602 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 NEDD8Q15843 81 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 NRN1LQ496H8 165 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 FAM76BQ5HYJ3 339 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 THEM4Q5T1C6 240 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 RIPPLY2Q5TAB7 128 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 DNM1P34Q6PK57 102 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 CD200R1LQ6Q8B3 271 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 SLC16A9Q7RTY1 509 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 GPR141Q7Z602 305 aa7.45□□□□□ -1.22
VPS29-203ENST00000546588 YRDCQ86U90 279 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms