RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 STARD4Q96DR4 205 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 LRRC46Q96FV0 321 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 BOD1Q96IK1 185 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 DMRTA2Q96SC8 542 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 TBX5Q99593 518 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 SPOCK3Q9BQ16 436 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 HDHD5Q9BXW7 423 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 MROQ9BYG7 248 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 OBP2BQ9NPH6 170 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 TRIM36Q9NQ86 728 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 COQ3Q9NZJ6 369 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 CYB5R1Q9UHQ9 305 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 FBXL3Q9UKT7 428 aa8.35□□□□□ -1.07
YBX3-215ENST00000544504 PHF3Q92576 2039 aaKnown RBP8.34□□□□□ -1.07
YBX3-215ENST00000544504 CIB4A0PJX0 185 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 METTL15A6NJ78 407 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ZNF878C9JN71 531 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 TOXO94900 526 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 UBL3O95164 117 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 CGAP01215 116 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 COX5AP20674 150 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 PCMT1P22061 227 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 CDAP32320 146 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 DCTDP32321 178 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ARR3P36575 388 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ZNF85Q03923 595 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 PIGFQ07326 219 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ACSM1Q08AH1 577 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 FOXF2Q12947 444 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 MED22Q15528 200 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 NEDD8Q15843 81 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 SLC25A35Q3KQZ1 300 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 SYT6Q5T7P8 510 aaPredicted RBP8.34□□□□□ -1.07
YBX3-215ENST00000544504 TMEM53Q6P2H8 277 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 VWA1Q6PCB0 445 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 C3P1Q6ZMU1 363 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 DCXRQ7Z4W1 244 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 KRT77Q7Z794 578 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.34□□□□□ -1.07
YBX3-215ENST00000544504 ZGRF1Q86YA3 2104 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ZNF679Q8IYX0 411 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ALDH16A1Q8IZ83 802 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 OR1K1Q8NGR3 316 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 SGCDQ92629 289 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 MUL1Q969V5 352 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 NABP1Q96AH0 204 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 COG8Q96MW5 612 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 FOXN4Q96NZ1 517 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ABHD6Q9BV23 337 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ZNF416Q9BWM5 594 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 HDHD2Q9H0R4 259 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 EMC7Q9NPA0 242 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ELOVL5Q9NYP7 299 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 NDUFA13Q9P0J0 144 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ASH2LQ9UBL3 628 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 PRSS50Q9UI38 385 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 ATPIF1Q9UII2 106 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 SH3BGRL2Q9UJC5 107 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 IKZF2Q9UKS7 526 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 TIMM10BQ9Y5J6 103 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 LHFPL6Q9Y693 200 aa8.34□□□□□ -1.07
YBX3-215ENST00000544504 A0A0G2JNJ9 132 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 C19orf84I3L1E1 186 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 J3QLW9 94 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 MPZL1O95297 269 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 GPANK1O95872 356 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 PTHP01270 115 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 TFAP2AP05549 437 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ITGA5P08648 1049 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 H2BFMP0C1H6 154 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 B4GALT1P15291 398 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ZNF19P17023 458 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 PSMB9P28065 219 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 CHRNB4P30926 498 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 MAP2K4P45985 399 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ALDH3B2P48448 385 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 RIDAP52758 137 aaKnown RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 UBE2NP61088 152 aaKnown RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 GRB2P62993 217 aaKnown RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 HIST1H3AP68431 136 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 PLP2Q04941 152 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 MLLT11Q13015 90 aaPredicted RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 GPR50Q13585 617 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ENDOGQ14249 297 aaKnown RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 RAB35Q15286 201 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 TAF13Q15543 124 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 MEP1BQ16820 701 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 TIGD6Q17RP2 521 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ZNF829Q3KNS6 432 aaPredicted RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 CCDC58Q4VC31 144 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 HIST2H3PS2Q5TEC6 136 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 XAF1Q6GPH4 301 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 HIST2H3AQ71DI3 136 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 LINGO2Q7L985 606 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.33□□□□□ -1.08
YBX3-215ENST00000544504 GPR141Q7Z602 305 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 P2RY8Q86VZ1 359 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 GABRG1Q8N1C3 465 aa8.33□□□□□ -1.08
YBX3-215ENST00000544504 ZNF433Q8N7K0 673 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms