RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 MAD2L1BPQ15013 274 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RCN1Q15293 331 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 KCNMB1Q16558 191 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 NKPD1Q17RQ9 610 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 PGBD2Q6P3X8 592 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TMEM154Q6P9G4 183 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ICA1LQ8NDH6 482 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 FANK1Q8TC84 345 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RDH5Q92781 318 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 MARS2Q96GW9 593 aaKnown RBP8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 C4orf45Q96LM5 186 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 SNX18Q96RF0 628 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RNPEPL1Q9HAU8 725 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 HINT3Q9NQE9 182 aaKnown RBP8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 NDRG4Q9ULP0 352 aaKnown RBP8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 LYVE1Q9Y5Y7 322 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 WNK2Q9Y3S1 2297 aa8.33□□□□□ -1.08
TNFRSF1A-214ENST00000543048 IGHV4-61A0A0C4DH41 118 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 C17orf100A8MU93 164 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 SGCEO43556 437 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ICMTO60725 284 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 NGFP01138 241 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 GASTP01350 101 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 HPXP02790 462 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 MT-ND5P03915 603 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 IGHV4-31P0DP07 118 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 HIST1H1CP16403 213 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ZNF23P17027 643 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 HOXB6P17509 224 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TUBG1P23258 451 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 NOS3P29474 1203 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 CENPAP49450 140 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TMEM33P57088 247 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 PPP1CBP62140 327 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 MRPS11P82912 194 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 AQP6Q13520 282 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RIN1Q13671 783 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 PCGF3Q3KNV8 242 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ALKBH6Q3KRA9 238 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ELFN2Q5R3F8 820 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 MBNL2Q5VZF2 373 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR2T5Q6IEZ7 315 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RPL13AP3Q6NVV1 102 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 LEG1Q6P5S2 330 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 DNM1P34Q6PK57 102 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 JAZF1Q86VZ6 243 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 HIPK1Q86Z02 1210 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ZNF101Q8IZC7 436 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ADGRG5Q8IZF4 528 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR6V1Q8N148 313 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR4C15Q8NGM1 316 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR2T29Q8NH02 315 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR4K13Q8NH42 304 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 SLC25A40Q8TBP6 338 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 SNX33Q8WV41 574 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 PYDC1Q8WXC3 89 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 DUS3LQ96G46 650 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TSSK2Q96PF2 358 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 NMNAT3Q96T66 252 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 BPESC1Q9GZL8 116 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RASSF4Q9H2L5 321 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 DCLRE1BQ9H816 532 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 S100A14Q9HCY8 104 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TUBG2Q9NRH3 451 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TBCCD1Q9NVR7 557 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 NKIRAS2Q9NYR9 191 aa8.32□□□□□ -1.08
TNFRSF1A-214ENST00000543048 MXRA5Q9NR99 2828 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 A6NJY4 79 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 H3BNX3 289 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 H3BSA7 217 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 DOK2O60496 412 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TACSTD2P09758 323 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RAP2AP10114 183 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ACHEP22303 614 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 LIPAP38571 399 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 CHN2P52757 468 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 TEKQ02763 1124 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 PPP1R8Q12972 351 aaKnown RBP8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 MICAQ29983 383 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 SLC36A3Q495N2 470 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 CCDC92Q53HC0 331 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 SPATA46Q5T0L3 261 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 SLC35F1Q5T1Q4 408 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 C6orf52Q5T4I8 152 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ZNF770Q6IQ21 691 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ZNF620Q6ZNG0 422 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 RASSF6Q6ZTQ3 369 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ZBTB46Q86UZ6 589 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 NPEPL1Q8NDH3 523 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 GJC3Q8NFK1 279 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR9Q2Q8NGE9 314 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR52L1Q8NGH7 329 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR1F12Q8NHA8 337 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 ABHD4Q8TB40 342 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 KLF14Q8TD94 323 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 PTP4A1Q93096 173 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 OR2J1Q9GZK6 312 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 REEP1Q9H902 201 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 CHODLQ9H9P2 273 aa8.31□□□□□ -1.08
TNFRSF1A-214ENST00000543048 CYSLTR2Q9NS75 346 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms