RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 FAM219AQ8IW50 185 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 JAGN1Q8N5M9 183 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ACBD4Q8NC06 268 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TMEM52Q8NDY8 209 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 OR5AP2Q8NGF4 316 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ELP5Q8TE02 316 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 GPX8Q8TED1 209 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 RNF141Q8WVD5 230 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TCEAL3Q969E4 200 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 FOXRED1Q96CU9 486 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 UQCC1Q9NVA1 299 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 DNAJB12Q9NXW2 375 aaKnown RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 CSAG2Q9Y5P2 127 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ATG2BQ96BY7 2078 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TRBV5-5A0A0J9YX44 114 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 C1orf196B1AJZ1 125 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 PRKNO60260 465 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 CSTAP01040 98 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 RD3LP0DJH9 198 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SLC25A4P12235 298 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 CD38P28907 300 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 LSSP48449 732 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 PPT1P50897 306 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ZNHIT3Q15649 155 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 GFOD2Q3B7J2 385 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 RNASE10Q5GAN6 216 aaKnown RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 EEF1A1P5Q5VTE0 462 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 AGBL4Q5VU57 503 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 DNM1P46Q6ZS02 220 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 Q6ZSR6 202 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 RABEPKQ7Z6M1 372 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 C1orf210Q8IVY1 113 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 BAP18Q8IXM2 172 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TMEM229BQ8NBD8 167 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 OR4K17Q8NGC6 315 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 NUBPLQ8TB37 319 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ASB13Q8WXK3 278 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 RNF166Q96A37 237 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 C14orf79Q96F83 325 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TMEM68Q96MH6 324 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 OR2M4Q96R27 311 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ELF4Q99607 663 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 PHB2Q99623 299 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 CST11Q9H112 138 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 C1orf198Q9H425 327 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ELOVL3Q9HB03 270 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 CHMP1AQ9HD42 196 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 GSN-AS1Q9NRJ2 163 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 GRHPRQ9UBQ7 328 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 VSIG4Q9Y279 399 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 MRPS2Q9Y399 296 aaKnown RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TMED7Q9Y3B3 224 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SPACA6W5XKT8 324 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 DENND4AQ7Z401 1863 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 A0A1B0GTQ1 180 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TMEM212A6NML5 194 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 BCAT2O15382 392 aaPredicted RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TMEM127O75204 238 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ZNF432O94892 652 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ABOP16442 354 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SDHAP31040 664 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 HOXC12P31275 282 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 RPS15AP62244 130 aaKnown RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SPOCK1Q08629 439 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SRSF5Q13243 272 aaKnown RBP4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ENPP2Q13822 863 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ALG10Q5BKT4 473 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ZNF542PQ5EBM4 170 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 VWA2Q5GFL6 755 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 WDR38Q5JTN6 314 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ZNF684Q5T5D7 378 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 LPCAT3Q6P1A2 487 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 FBXO42Q6P3S6 717 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ZNF585AQ6P3V2 769 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ETV3LQ6ZN32 361 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 ZNF550Q7Z398 422 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TMEM200AQ86VY9 491 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 PRSS35Q8N3Z0 413 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 OR4A4PQ8NGN8 299 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 OR6S1Q8NH40 331 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 LMX1AQ8TE12 382 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 PIK3IP1Q96FE7 263 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 LRFN5Q96NI6 719 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 STACQ99469 402 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 APOOQ9BUR5 198 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SYT4Q9H2B2 425 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SEMA6CQ9H3T2 930 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SRMSQ9H3Y6 488 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 STARD5Q9NSY2 213 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SLC22A7Q9Y694 548 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 COLEC10Q9Y6Z7 277 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 TRPM6Q9BX84 2022 aa4.79□□□□□ -1.64
KDM3B-209ENST00000542866 SNRNP200O75643 2136 aaKnown RBP4.78□□□□□ -1.64
KDM3B-209ENST00000542866 A0A1B0GTI1 187 aa4.78□□□□□ -1.64
KDM3B-209ENST00000542866 A0A1W2PQF6 199 aa4.78□□□□□ -1.64
KDM3B-209ENST00000542866 URADA6NGE7 173 aa4.78□□□□□ -1.64
KDM3B-209ENST00000542866 B4DGG1 531 aa4.78□□□□□ -1.64
KDM3B-209ENST00000542866 SLC17A2O00624 439 aa4.78□□□□□ -1.64
KDM3B-209ENST00000542866 ARPC3O15145 178 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms