RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 CHD8Q9HCK8 2581 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 INTS1Q8N201 2190 aaKnown RBP11.63□□□□□ -0.55
CHFR-221ENST00000542714 SHANK1Q9Y566 2161 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 FIGNL2A6NMB9 653 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 ZNF878C9JN71 531 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 TNFSF13O75888 250 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 RGS9O75916 674 aaPredicted RBP11.63□□□□□ -0.55
CHFR-221ENST00000542714 HLA-DPB1P04440 258 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 ITGA5P08648 1049 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 H2BFMP0C1H6 154 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 CD8BP10966 210 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 ABOP16442 354 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 ZNF182P17025 639 aaPredicted RBP11.63□□□□□ -0.55
CHFR-221ENST00000542714 FGF9P31371 208 aaPredicted RBP11.63□□□□□ -0.55
CHFR-221ENST00000542714 PTGER4P35408 488 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 UGT2B10P36537 528 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 GUCA1AP43080 201 aaPredicted RBP11.63□□□□□ -0.55
CHFR-221ENST00000542714 FAPQ12884 760 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 SF3B4Q15427 424 aaKnown RBP eCLIP11.63□□□□□ -0.555e-7■■■□□ 19.2
CHFR-221ENST00000542714 NRN1LQ496H8 165 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 FBXW9Q5XUX1 488 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 C22orf42Q6IC83 251 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 OR2A2Q6IF42 318 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 GFRALQ6UXV0 394 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 ZNF813Q6ZN06 617 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 SKA3Q8IX90 412 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 UBE2J2Q8N2K1 259 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 OR6K3Q8NGY3 331 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 DYNC2LI1Q8TCX1 351 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 HAVCR2Q8TDQ0 301 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 PPP1R14AQ96A00 147 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 HDHD5Q9BXW7 423 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 DCSTAMPQ9H295 470 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 DDX28Q9NUL7 540 aaKnown RBP11.63□□□□□ -0.55
CHFR-221ENST00000542714 EMC9Q9Y3B6 208 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 R4GMQ9 66 aa11.63□□□□□ -0.55
CHFR-221ENST00000542714 GPRIN2O60269 458 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 ZFPL1O95159 310 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 IL18BPO95998 194 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 ZNF32P17041 273 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 GALP22466 123 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 ANOS1P23352 680 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 DCTDP32321 178 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 CCR9P51686 369 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 TRAM1Q15629 374 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 ELFN2Q5R3F8 820 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 USP43Q70EL4 1123 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 RHOUQ7L0Q8 258 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 BTLAQ7Z6A9 289 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 NAXEQ8NCW5 288 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 GJC3Q8NFK1 279 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 KBTBD8Q8NFY9 601 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 ABHD4Q8TB40 342 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 PPIL3Q9H2H8 161 aaKnown RBP11.62□□□□□ -0.55
CHFR-221ENST00000542714 G6PC2Q9NQR9 355 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 FAM206AQ9NX38 181 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 SLC22A13Q9Y226 551 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 ZNF281Q9Y2X9 895 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 LAMA5O15230 3695 aa11.62□□□□□ -0.55
CHFR-221ENST00000542714 A0A096LPE4 126 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 A0A1W2PPZ6 126 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 ZNF503-AS2A6NEH8 195 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 SYNGR3O43761 229 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 CGAP01215 116 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 MMP7P09237 267 aaPredicted RBP11.61□□□□□ -0.55
CHFR-221ENST00000542714 PATE4P0C8F1 98 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 GLI4P10075 376 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 CTSSP25774 331 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 MPGP29372 298 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 SERPINB10P48595 397 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 LY6DQ14210 128 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 RAB35Q15286 201 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 RSPO1Q2MKA7 263 aaPredicted RBP11.61□□□□□ -0.55
CHFR-221ENST00000542714 UNQ9370/PRO34162Q6UXP9 181 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 C3P1Q6ZMU1 363 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 CNEP1R1Q8N9A8 125 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 OR1K1Q8NGR3 316 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 OR10AC1Q8NH08 325 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 OR5AK2Q8NH90 309 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 BCL2L2Q92843 193 aaPredicted RBP11.61□□□□□ -0.55
CHFR-221ENST00000542714 STARD4Q96DR4 205 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 COQ7Q99807 217 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 OR2H1Q9GZK4 316 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 WNT5BQ9H1J7 359 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 NOX3Q9HBY0 568 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 PMF1-BGLAPU3KQ54 211 aa11.61□□□□□ -0.55
CHFR-221ENST00000542714 BSNQ9UPA5 3926 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 TRBV5-5A0A0J9YX44 114 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 OR6C6A6NF89 314 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 TMEM212A6NML5 194 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 LOC110117498-PIK3R3F6TDL0 507 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 SLC19A2O60779 497 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 CRHP06850 196 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 HOXD4P09016 255 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 CLEC2LP0C7M8 214 aa11.6□□□□□ -0.55
CHFR-221ENST00000542714 TMIGD3P0DMS9 266 aaPredicted RBP11.6□□□□□ -0.55
CHFR-221ENST00000542714 CRYGSP22914 178 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms