RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 WDR76Q9H967 626 aa7.72□□□□□ -1.17
THBS3-210ENST00000541576 CCDC59Q9P031 241 aaKnown RBP7.72□□□□□ -1.17
THBS3-210ENST00000541576 EIF3KQ9UBQ5 218 aaKnown RBP7.72□□□□□ -1.17
THBS3-210ENST00000541576 COA3Q9Y2R0 106 aaPredicted RBP7.72□□□□□ -1.17
THBS3-210ENST00000541576 KLHDC2Q9Y2U9 406 aa7.72□□□□□ -1.17
THBS3-210ENST00000541576 PCDHGA9Q9Y5G4 932 aaKnown RBP7.72□□□□□ -1.17
THBS3-210ENST00000541576 IGKV1D-43A0A0B4J1Z2 117 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 INMT-MINDY4F8WBC2 141 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 J3QLW9 94 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 ITGB2P05107 769 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 PGA4P0DJD7 388 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 PGA3P0DJD8 388 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 ZNF19P17023 458 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 RPS27P42677 84 aaKnown RBP7.71□□□□□ -1.17
THBS3-210ENST00000541576 ACTA2P62736 377 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 RPS25P62851 125 aaKnown RBP7.71□□□□□ -1.17
THBS3-210ENST00000541576 ACTG2P63267 376 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 ACSM1Q08AH1 577 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 MAB21L1Q13394 359 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 THEM4Q5T1C6 240 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 CARD17Q5XLA6 110 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 IGFL3Q6UXB1 125 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 IDO2Q6ZQW0 420 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 LINC00299Q6ZSB3 139 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 SNX33Q8WV41 574 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 ROBO4Q8WZ75 1007 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 UPRTQ96BW1 309 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 MRPL48Q96GC5 212 aaKnown RBP7.71□□□□□ -1.17
THBS3-210ENST00000541576 ZNF845Q96IR2 970 aaPredicted RBP7.71□□□□□ -1.17
THBS3-210ENST00000541576 C4orf36Q96KX1 117 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 DCBLD2Q96PD2 775 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 SAV1Q9H4B6 383 aaPredicted RBP7.71□□□□□ -1.17
THBS3-210ENST00000541576 EXO5Q9H790 373 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 ZDHHC11Q9H8X9 412 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 TRIM36Q9NQ86 728 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 DKK4Q9UBT3 224 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 LIPGQ9Y5X9 500 aa7.71□□□□□ -1.17
THBS3-210ENST00000541576 ZNF670-ZNF695F2Z2N8 137 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 RRP8O43159 456 aaKnown RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 KHDRBS3O75525 346 aaKnown RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 ACTL6AO96019 429 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 CELP19835 753 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 CAPZA2P47755 286 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 HSF2Q03933 536 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 TP53I3Q53FA7 332 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 CNIH2Q6PI25 160 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 DPY19L4Q7Z388 723 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 NEIL3Q8TAT5 605 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 ZNF385AQ96PM9 386 aaKnown RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 MNTQ99583 582 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 TMED9Q9BVK6 235 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 TNRC6AQ8NDV7 1962 aaKnown RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 TRGV5A0A0B4J1U4 118 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 LGALS8O00214 317 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 MPZL1O95297 269 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 ARSBP15848 533 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 RPL35P42766 123 aaKnown RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 BDH1Q02338 343 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 ABLIM2Q6H8Q1 611 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 LAMTOR1Q6IAA8 161 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 RPTNQ6XPR3 784 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 FCRLAQ7L513 359 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 CDC20BQ86Y33 519 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 SYS1Q8N2H4 156 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 ANGPTL6Q8NI99 470 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 NSMAFQ92636 917 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 FBXW5Q969U6 566 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 DCLRE1CQ96SD1 692 aaKnown RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 MED28Q9H204 178 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 MRPL22Q9NWU5 206 aaKnown RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 LAMP5Q9UJQ1 280 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 ING1Q9UK53 422 aaPredicted RBP7.71□□□□□ -1.18
THBS3-210ENST00000541576 TMEM14AQ9Y6G1 99 aa7.71□□□□□ -1.18
THBS3-210ENST00000541576 CHD8Q9HCK8 2581 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 PSMD9O00233 223 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 ZNF593O00488 134 aaPredicted RBP7.7□□□□□ -1.18
THBS3-210ENST00000541576 NR2C1P13056 603 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 ADAM8P78325 824 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 ZNF169Q14929 603 aaPredicted RBP7.7□□□□□ -1.18
THBS3-210ENST00000541576 TRAF4Q9BUZ4 470 aaPredicted RBP7.7□□□□□ -1.18
THBS3-210ENST00000541576 BRD7Q9NPI1 651 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 NPAP1Q9NZP6 1156 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 STUB1Q9UNE7 303 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 ZNF716A6NP11 495 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 LYRM1O43325 122 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 SLC22A5O76082 557 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 SRP9P49458 86 aaKnown RBP7.7□□□□□ -1.18
THBS3-210ENST00000541576 RAB14P61106 215 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 MEP1BQ16820 701 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 ZNF684Q5T5D7 378 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 SLC51BQ86UW2 128 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 ZIC4Q8N9L1 334 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 SLC26A10Q8NG04 563 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 OR6N1Q8NGY5 312 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 OTOSQ8NHW6 89 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 PELI1Q96FA3 418 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 OR2M2Q96R28 347 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 MIXL1Q9H2W2 232 aa7.7□□□□□ -1.18
THBS3-210ENST00000541576 CLEC4MQ9H2X3 399 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms