RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 COA3Q9Y2R0 106 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 PTGER4P35408 488 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 CDK5Q00535 292 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 PNLIPRP3Q17RR3 467 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 METRNLQ641Q3 311 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 B3GNTL1Q67FW5 361 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 CORO6Q6QEF8 472 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 ARRDC1Q8N5I2 433 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 KLHDC1Q8N7A1 406 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 LHFPL5Q8TAF8 219 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 VPS25Q9BRG1 176 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 ZNF251Q9BRH9 671 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 KCNG2Q9UJ96 466 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 FLVCR1Q9Y5Y0 555 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 POMT1Q9Y6A1 747 aa13.66□□□□□ -0.22
SMARCA4-207ENST00000541122 A0A1W2PR48 441 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 F11P03951 625 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 CEBPBP17676 345 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 FKBP2P26885 142 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 KCNJ3P48549 501 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 HOXA1P49639 335 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 HMGA2P52926 109 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 TMEM128Q5BJH2 165 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 SLC5A6Q9Y289 635 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 H3BQ06 376 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 SMIM6P0DI80 62 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 LILRA3Q8N6C8 439 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 OR13D1Q8NGV5 346 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 ZFPM2Q8WW38 1151 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 FBXW5Q969U6 566 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 GHRLQ9UBU3 117 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 KLF15Q9UIH9 416 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 GDF2Q9UK05 429 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 A0A1B0GTL3 188 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 CCDC85CA6NKD9 419 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 SLC17A2O00624 439 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 MPPED1O15442 326 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 TMPRSS11DO60235 418 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 DVL1P1P54792 670 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 TLE1Q04724 770 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 TMEM176BQ3YBM2 270 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 DND1Q8IYX4 353 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 ARHGEF39Q8N4T4 335 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 ARIH2OSQ8N7S6 290 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 CDCP1Q9H5V8 836 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 DAPP1Q9UN19 280 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 FOXJ3Q9UPW0 622 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 NTNG1Q9Y2I2 539 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 PIAS3Q9Y6X2 628 aa13.65□□□□□ -0.22
SMARCA4-207ENST00000541122 RAB27BO00194 218 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 GLSO94925 669 aaPredicted RBP13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 CST4P01036 141 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 IGLV3-27P01718 113 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 SPP1P10451 314 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 MGST1P10620 155 aaKnown RBP13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC6A1P30531 599 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 HRH1P35367 487 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 RNF151Q2KHN1 245 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 CD300LDQ6UXZ3 194 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 R4GMQ9 66 aa13.65□□□□□ -0.23
SMARCA4-207ENST00000541122 A0A087WV62 115 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 PLPP2O43688 288 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 CBX7O95931 251 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 BSGP35613 385 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 PCBP4P57723 403 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 SRYQ05066 204 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 CATSPERDQ86XM0 798 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 OR4N2Q8NGD1 307 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 AKR7LQ8NHP1 331 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 CXorf58Q96LI9 332 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 HCFC1R1Q9NWW0 138 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 IL20Q9NYY1 176 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 SERTM1A2A2V5 107 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 CLN5O75503 358 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 RPA2P15927 270 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 CST5P28325 142 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF626Q68DY1 528 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 TFAP2EQ6VUC0 442 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 MSRB3Q8IXL7 192 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 LRRC18Q8N456 261 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 MARCH1Q8TCQ1 289 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 HSD17B8Q92506 261 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 PIGTQ969N2 578 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 BSCL2Q96G97 398 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 BANF2Q9H503 90 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 ACAD8Q9UKU7 415 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 PIGLQ9Y2B2 252 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 CDC14CA4D256 554 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 PHOX2AO14813 284 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 HRO43593 1189 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 C1QAP02745 245 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 HSD17B7P56937 341 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 SLC17A1Q14916 467 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 FAM26DQ5JW98 314 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 ABHD17BQ5VST6 288 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 ZNF787Q6DD87 383 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 OR6S1Q8NH40 331 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 DERL3Q96Q80 235 aa13.64□□□□□ -0.23
SMARCA4-207ENST00000541122 EXOGQ9Y2C4 368 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms