RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OR11A1Q9GZK7 315 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 SYT4Q9H2B2 425 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 B3GAT2Q9NPZ5 323 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 AKIP1Q9NQ31 210 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 SNTG1Q9NSN8 517 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 GNG8Q9UK08 70 aa7.4□□□□□ -1.22
CHD4-208ENST00000540960 SF3B6Q9Y3B4 125 aaKnown RBP7.4□□□□□ -1.22
CHD4-208ENST00000540960 A0A1B0GTH9 108 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 SLC35F4A4IF30 521 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 OR5H15A6NDH6 313 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 ACOD1A6NK06 481 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 NPIPA2E9PIF3 369 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 NPIPA3F8WFD2 350 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 MS4A18H0YCH9 400 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 H3BML4 177 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 ACOT7O00154 380 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 GPR171O14626 319 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 ZNF354AO60765 605 aaPredicted RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 TPPPO94811 219 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 APOA1P02647 267 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 GYPBP06028 91 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 MRPL3P09001 348 aaKnown RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 CCL3P10147 92 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 IFNGR1P15260 489 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 EDNRAP25101 427 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 OPRL1P41146 370 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 NAA10P41227 235 aaPredicted RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 RIDAP52758 137 aaKnown RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 SCAND1P57086 179 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 OR12D2P58182 307 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 RPS25P62851 125 aaKnown RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 POU3F1Q03052 451 aaPredicted RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 CDK5R1Q15078 307 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 TOMM20Q15388 145 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 MS4A18Q3C1V0 323 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 PRAMEF20Q5VT98 475 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 C22orf42Q6IC83 251 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 TMEM211Q6ICI0 200 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 LRRN1Q6UXK5 716 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 BAIAP2L2Q6UXY1 529 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 ZNF704Q6ZNC4 412 aaPredicted RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 CEACAM19Q7Z692 300 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 KRT77Q7Z794 578 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 PM20D2Q8IYS1 436 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 ZNF679Q8IYX0 411 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 OR6V1Q8N148 313 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 YIPF7Q8N8F6 280 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 TMEM178AQ8NBL3 297 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 CCDC54Q8NEL0 328 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 OR6N2Q8NGY6 317 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 OR2AJ1Q8NGZ0 328 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 POC1BQ8TC44 478 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 NSMAFQ92636 917 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 GHSRQ92847 366 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 ITFG2Q969R8 447 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 TMEM203Q969S6 136 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 JSRP1Q96MG2 331 aaPredicted RBP7.39□□□□□ -1.23
CHD4-208ENST00000540960 SFXN2Q96NB2 322 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 SIGLEC12Q96PQ1 595 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 KCNK17Q96T54 332 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 TBX5Q99593 518 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 SP140LQ9H930 580 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 SMURF1Q9HCE7 757 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 CKLFQ9UBR5 152 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 FBXL2Q9UKC9 423 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 IKZF2Q9UKS7 526 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 RCE1Q9Y256 329 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 CMAHPQ9Y471 501 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 ZNF407Q9C0G0 2248 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 NINQ8N4C6 2090 aa7.39□□□□□ -1.23
CHD4-208ENST00000540960 IGLV1-36A0A0B4J1U3 117 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 OR2M5A3KFT3 312 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 MEGF11A6BM72 1044 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 C2orf72A6NCS6 295 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ZNF593O00488 134 aaPredicted RBP7.38□□□□□ -1.23
CHD4-208ENST00000540960 RGS5O15539 181 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 SELENOFO60613 162 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ACTL6AO96019 429 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 CD2P06729 351 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 CLUP10909 449 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 IMPDH2P12268 514 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ENPP1P22413 925 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 LAP3P28838 519 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 PTGS2P35354 604 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 RPS19P39019 145 aaKnown RBP7.38□□□□□ -1.23
CHD4-208ENST00000540960 ZNF84P51523 738 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 CARD18P57730 90 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 FABP5Q01469 135 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 SLC3A1Q07837 685 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ALKBH1Q13686 389 aaKnown RBP7.38□□□□□ -1.23
CHD4-208ENST00000540960 STK11Q15831 433 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 KCNMB1Q16558 191 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 PCK2Q16822 640 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 HYAL4Q2M3T9 481 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 ACSM3Q53FZ2 586 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 HSD17B12Q53GQ0 312 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 KLHL24Q6TFL4 600 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 SLC22A16Q86VW1 577 aa7.38□□□□□ -1.23
CHD4-208ENST00000540960 BEST3Q8N1M1 668 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms