RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 RPP14O95059 124 aaKnown RBP12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 WNT11O96014 354 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 SERPINA3P01011 423 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 OPRL1P41146 370 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 NANOS3P60323 173 aaKnown RBP12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 SGCAQ16586 387 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 NRN1LQ496H8 165 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 KRTCAP3Q53RY4 240 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 TSPO2Q5TGU0 170 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 FAM27BQ5VT28 67 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 C22orf42Q6IC83 251 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 CORO6Q6QEF8 472 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 TMEM91Q6ZNR0 172 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 P4HA3Q7Z4N8 544 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 GHSRQ92847 366 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 APH1AQ96BI3 265 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 GMPPAQ96IJ6 420 aaPredicted RBP12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 MAP6Q96JE9 813 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 ALKBH3Q96Q83 286 aaPredicted RBP12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF416Q9BWM5 594 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 HDHD5Q9BXW7 423 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 WDR12Q9GZL7 423 aaKnown RBP12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 TMEM38BQ9NVV0 291 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 CLEC4AQ9UMR7 237 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 LRP12Q9Y561 859 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 CACNA1CQ13936 2221 aa12.54□□□□□ -0.4
CYB561A3-216ENST00000540755 SS18L1O75177 396 aaPredicted RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 INHBBP09529 407 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 AGTR1P30556 359 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 DCTDP32321 178 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 UQCRFS1P47985 274 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 CCR9P51686 369 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF846Q147U1 533 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 SF3B4Q15427 424 aaKnown RBP eCLIP12.53□□□□□ -0.44e-8■■■■■ 42.5
CYB561A3-216ENST00000540755 CEACAM16Q2WEN9 425 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF324BQ6AW86 544 aaPredicted RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF544Q6NX49 715 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 LINGO2Q7L985 606 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 TEX19Q8NA77 164 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 OR2G2Q8NGZ5 317 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ABHD4Q8TB40 342 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 HSD17B8Q92506 261 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF837Q96EG3 531 aaPredicted RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 DCLRE1CQ96SD1 692 aaKnown RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 FOXB1Q99853 325 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ASH2LQ9UBL3 628 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 DOPEY1Q5JWR5 2465 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 CD8B2A6NJW9 211 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 CLDN25C9JDP6 229 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF878C9JN71 531 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 SRSF10O75494 262 aaKnown RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 KRT33AO76009 404 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 H2BFMP0C1H6 154 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 CD8BP10966 210 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 RPS11P62280 158 aaKnown RBP eCLIP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 HIST1H3AP68431 136 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 YIF1BQ5BJH7 314 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 HIST2H3PS2Q5TEC6 136 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 CFAP77Q6ZQR2 320 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 HIST2H3AQ71DI3 136 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 SPATC1Q76KD6 591 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 NUFIP2Q7Z417 695 aaKnown RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 FGD2Q7Z6J4 655 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 Q8NA96 180 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 OR10S1Q8NGN2 331 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 HTRA1Q92743 480 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 WNT2BQ93097 391 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 C4orf45Q96LM5 186 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 TRIB1Q96RU8 372 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 MED18Q9BUE0 208 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 NXF2Q9GZY0 626 aaKnown RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 PNRC2Q9NPJ4 139 aaKnown RBP12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 GALNT8Q9NY28 637 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 FRRS1LQ9P0K9 344 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 LUZP4Q9P127 313 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF281Q9Y2X9 895 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 R4GMQ9 66 aa12.53□□□□□ -0.4
CYB561A3-216ENST00000540755 GTF3C1Q12789 2109 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 DOCK7Q96N67 2140 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 TMEM212A6NML5 194 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 OR4C45A6NMZ5 311 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 ZNF587BE7ETH6 402 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 ZFPL1O95159 310 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 IL1AP01583 271 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 CST2P09228 141 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 ACSM3Q53FZ2 586 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 PAMR1Q6UXH9 720 aa12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.52□□□□□ -0.41
CYB561A3-216ENST00000540755 ZNF100Q8IYN0 542 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms