RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 OR2V2Q96R30 315 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 MS4A7Q9GZW8 240 aaPredicted RBP10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 POFUT1Q9H488 388 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 ATPIF1Q9UII2 106 aa10.09□□□□□ -0.79
CBX3P4-202ENST00000540428 TEX13CA0A0J9YWL9 993 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 CEACAM18A8MTB9 384 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 XKRYO14609 159 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 IFNW1P05000 195 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 CD14P08571 375 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 WNT2P09544 360 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 RGS6P49758 472 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 MMP16P51512 607 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 LSM6P62312 80 aaKnown RBP10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 BTNL3Q6UXE8 466 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 TMPRSS11FQ6ZWK6 438 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 VASH1Q7L8A9 365 aaPredicted RBP10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 MICU2Q8IYU8 434 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 BCL6BQ8N143 479 aaPredicted RBP10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 OR2T12Q8NG77 320 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 OR13C2Q8NGS9 318 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 ACOT11Q8WXI4 607 aaPredicted RBP10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 UPRTQ96BW1 309 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 DUX5Q96PT3 197 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 FNDC11Q9BVV2 318 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 NDEL1Q9GZM8 345 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 SLITRK2Q9H156 845 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 UNKLQ9H9P5 680 aaKnown RBP10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 GCM1Q9NP62 436 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 EMC7Q9NPA0 242 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 GID8Q9NWU2 228 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 GRHPRQ9UBQ7 328 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 AP3M1Q9Y2T2 418 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 STARD10Q9Y365 291 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 MEGF8Q7Z7M0 2845 aa10.08□□□□□ -0.8
CBX3P4-202ENST00000540428 ARHGAP32A7KAX9 2087 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 A0A087WUU8 490 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 ELOVL7A1L3X0 281 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 PRSS37A4D1T9 235 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 OR6C6A6NF89 314 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 H7C1C5 153 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 PLATP00750 562 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 CD80P33681 288 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 RPL4P36578 427 aaKnown RBP10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 LCN6P62502 163 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 PAX2Q02962 417 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 KLF10Q13118 480 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 HNRNPA0Q13151 305 aaKnown RBP10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 SLC9A3R2Q15599 337 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF181Q2M3W8 571 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 MESTQ5EB52 335 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 LEG1Q6P5S2 330 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 TREML4Q6UXN2 200 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 FBXW12Q6X9E4 464 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 MBOAT2Q6ZWT7 520 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 FAM122BQ7Z309 247 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 PARP8Q8N3A8 854 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 OR52E2Q8NGJ4 325 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 OR5L1Q8NGL2 311 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 OR13G1Q8NGZ3 307 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 DACT3Q96B18 629 aaPredicted RBP10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 RASD2Q96D21 266 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 PLEKHA8Q96JA3 519 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 SSBP3Q9BWW4 388 aaPredicted RBP10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 C1QTNF5Q9BXJ0 243 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 TMEM120AQ9BXJ8 343 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 MIOXQ9UGB7 285 aa10.07□□□□□ -0.8
CBX3P4-202ENST00000540428 IGHV2-70DA0A0C4DH43 119 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 CDC42EP2O14613 210 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 FFAR1O14842 300 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 KHDRBS3O75525 346 aaKnown RBP10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 RPS2P15880 293 aaKnown RBP10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 CTLA4P16410 223 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 FUT4P22083 530 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 YAP1P46937 504 aaKnown RBP10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 SRP9P49458 86 aaKnown RBP10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ERFP50548 548 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 GNB2P62879 340 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ZBED5Q49AG3 693 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 GPR139Q6DWJ6 353 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF730Q6ZMV8 503 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 KLBQ86Z14 1044 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ATG16L2Q8NAA4 619 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 OR8G5Q8NG78 346 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 OR1F12Q8NHA8 337 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 RAB40AQ8WXH6 277 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 MEGF10Q96KG7 1140 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 Q96M85 177 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ZNF570Q96NI8 536 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 GPX7Q96SL4 187 aaPredicted RBP10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ANKRD19PQ9H560 264 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 NMNAT1Q9HAN9 279 aaPredicted RBP10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 TMEM165Q9HC07 324 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 RHCGQ9UBD6 479 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ASH2LQ9UBL3 628 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 TMEM5Q9Y2B1 443 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 ADAM18Q9Y3Q7 739 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 SNX13Q9Y5W8 968 aa10.06□□□□□ -0.8
CBX3P4-202ENST00000540428 A0A1B0GUS0 222 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 IQCF6A8MYZ5 107 aa10.05□□□□□ -0.8
CBX3P4-202ENST00000540428 J3KTA2 159 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms