RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CCDC92Q53HC0 331 aaPredicted RBP11.49□□□□□ -0.57
CCDC130-202ENST00000540216 MBNL2Q5VZF2 373 aaKnown RBP11.49□□□□□ -0.57
CCDC130-202ENST00000540216 SLC27A4Q6P1M0 643 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 RFPL4BQ6ZWI9 263 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 HS3ST5Q8IZT8 346 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 ATG16L2Q8NAA4 619 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 ICA1LQ8NDH6 482 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 OR2AJ1Q8NGZ0 328 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 C10orf105Q8TEF2 133 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 SNX33Q8WV41 574 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 COG8Q96MW5 612 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 DCLRE1CQ96SD1 692 aaKnown RBP11.49□□□□□ -0.57
CCDC130-202ENST00000540216 COQ7Q99807 217 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 RBM4Q9BWF3 364 aaKnown RBP11.49□□□□□ -0.57
CCDC130-202ENST00000540216 CDADC1Q9BWV3 514 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 TEX12Q9BXU0 123 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 NMNAT2Q9BZQ4 307 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 NTN4Q9HB63 628 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 TBCCD1Q9NVR7 557 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 KIF17Q9P2E2 1029 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 FZR1Q9UM11 496 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 AP4S1Q9Y587 144 aa11.49□□□□□ -0.57
CCDC130-202ENST00000540216 IGHV4-30-2A0A087WSY4 118 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 SMAD7O15105 426 aaKnown RBP11.48□□□□□ -0.57
CCDC130-202ENST00000540216 RER1O15258 196 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 GPANK1O95872 356 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 HEXAP06865 529 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF823P16415 610 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 PAICSP22234 425 aaKnown RBP11.48□□□□□ -0.57
CCDC130-202ENST00000540216 GGT2P36268 569 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 ALDH3B1P43353 468 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 RGS6P49758 472 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 ECH1Q13011 328 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 CRMP1Q14194 572 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 ELFN2Q5R3F8 820 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 FAHD1Q6P587 224 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 CLEC9AQ6UXN8 241 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.48□□□□□ -0.57
CCDC130-202ENST00000540216 LRP11Q86VZ4 500 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 HIPK1Q86Z02 1210 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 PARP8Q8N3A8 854 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 OR5K1Q8NHB7 308 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 MARS2Q96GW9 593 aaKnown RBP11.48□□□□□ -0.57
CCDC130-202ENST00000540216 HINT3Q9NQE9 182 aaKnown RBP11.48□□□□□ -0.57
CCDC130-202ENST00000540216 MYEF2Q9P2K5 600 aaKnown RBP11.48□□□□□ -0.57
CCDC130-202ENST00000540216 CGGBP1Q9UFW8 167 aaPredicted RBP11.48□□□□□ -0.57
CCDC130-202ENST00000540216 CYB5R1Q9UHQ9 305 aa11.48□□□□□ -0.57
CCDC130-202ENST00000540216 LY6HO94772 140 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 HMGN1P05114 100 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 DAOP14920 347 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 SPI1P17947 270 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 PRKACGP22612 351 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 POU1F1P28069 291 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 FMO3P31513 532 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 PYCR1P32322 319 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 LIPAP38571 399 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 MRPS11P82912 194 aaKnown RBP11.47□□□□□ -0.57
CCDC130-202ENST00000540216 MAD2L1BPQ15013 274 aaPredicted RBP11.47□□□□□ -0.57
CCDC130-202ENST00000540216 PCGF3Q3KNV8 242 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 ZMAT1Q5H9K5 638 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 SLC18B1Q6NT16 456 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF540Q8NDQ6 660 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 SLC25A40Q8TBP6 338 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 KLF14Q8TD94 323 aaPredicted RBP11.47□□□□□ -0.57
CCDC130-202ENST00000540216 PIMREGQ9BSJ6 248 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 OR2J1Q9GZK6 312 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 TPK1Q9H3S4 243 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 GSX1Q9H4S2 264 aaPredicted RBP11.47□□□□□ -0.57
CCDC130-202ENST00000540216 SLC25A19Q9HC21 320 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 PAPOLBQ9NRJ5 636 aaKnown RBP11.47□□□□□ -0.57
CCDC130-202ENST00000540216 MRPL22Q9NWU5 206 aaKnown RBP11.47□□□□□ -0.57
CCDC130-202ENST00000540216 NKIRAS2Q9NYR9 191 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 TAAR3PQ9P1P4 343 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 ENOPH1Q9UHY7 261 aa11.47□□□□□ -0.57
CCDC130-202ENST00000540216 A0A096LNT2 108 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 G3V2T6 193 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 CLPTM1O96005 669 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 NGFP01138 241 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 RIPPLY3P57055 190 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 CDK5Q00535 292 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 LOXL1Q08397 574 aaPredicted RBP11.46□□□□□ -0.57
CCDC130-202ENST00000540216 GINS1Q14691 196 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 PCK2Q16822 640 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 SPATA46Q5T0L3 261 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 TMEM154Q6P9G4 183 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 CORO6Q6QEF8 472 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 CFAP77Q6ZQR2 320 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 ZDHHC13Q8IUH4 622 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 LINC00346Q8IVM7 164 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 ZCCHC24Q8N2G6 241 aaKnown RBP11.46□□□□□ -0.57
CCDC130-202ENST00000540216 ZNF786Q8N393 782 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 IQCF1Q8N6M8 205 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 OR5L1Q8NGL2 311 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 UBASH3BQ8TF42 649 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 PITX2Q99697 317 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 ATF6BQ99941 703 aa11.46□□□□□ -0.57
CCDC130-202ENST00000540216 SMR3AQ99954 134 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms