RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 MAMSTRQ6ZN01 415 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 MAMDC2Q7Z304 686 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 OR2W3Q7Z3T1 314 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 GABRG1Q8N1C3 465 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 TMEM104Q8NE00 496 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 OR56B2PQ8NGI1 322 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 OR6N2Q8NGY6 317 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 OR2AJ1Q8NGZ0 328 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 OR51F2Q8NH61 342 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 NEURL3Q96EH8 262 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 WDR89Q96FK6 387 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 TRMT61AQ96FX7 289 aaKnown RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 MIXL1Q9H2W2 232 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 METTL1Q9UBP6 276 aaKnown RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 UTS2RQ9UKP6 389 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 SLC35A3Q9Y2D2 325 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 ANKRD12Q6UB98 2062 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 TMEM265A0A087WTH1 108 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 C17orf112F2Z3M2 114 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 H7BYZ3 331 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 APBB3O95704 486 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 CASRP41180 1078 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 SLC6A11P48066 632 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 YPEL5P62699 121 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 CXADRP78310 365 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 HTRA3P83110 453 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 RELQ04864 619 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 SQSTM1Q13501 440 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 PMS2P11Q13670 270 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 SURF2Q15527 256 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 ST3GAL2Q16842 350 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 VWA2Q5GFL6 755 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 LEMD1Q68G75 181 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 PTOV1Q86YD1 416 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 KLHL15Q96M94 604 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 NMNAT2Q9BZQ4 307 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 RIMS4Q9H426 269 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 CYSLTR2Q9NS75 346 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF701Q9NV72 531 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 RLIMQ9NVW2 624 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 J3KTA2 159 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 EIF1BO60739 113 aaKnown RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 TACR3P29371 465 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 ARR3P36575 388 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 EIF1P41567 113 aaKnown RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 GPR4P46093 362 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
PTPRD-214ENST00000540109 MPEG1Q2M385 716 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 EOGTQ5NDL2 527 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 ZNF684Q5T5D7 378 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 PRR27Q6MZM9 219 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 TMEM151BQ8IW70 566 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 HSD17B11Q8NBQ5 300 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 SLC38A9Q8NBW4 561 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 LGALS14Q8TCE9 139 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 FAM216AQ8WUB2 273 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 GGACTQ9BVM4 153 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 MCOLN1Q9GZU1 580 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 SRPK3Q9UPE1 567 aa5.53□□□□□ -1.52
PTPRD-214ENST00000540109 A0A1B0GTQ1 180 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 RNGTTO60942 597 aaKnown RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 AMY2BP19961 511 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CTHP32929 405 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 SEMG2Q02383 582 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ZXDCQ2QGD7 858 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF619Q8N2I2 560 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF808Q8N4W9 903 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ZDHHC22Q8N966 263 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 OR1E3Q8WZA6 343 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PSMF1Q92530 271 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 FOXJ1Q92949 421 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CMKLR1Q99788 373 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 POFUT1Q9H488 388 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 C2orf42Q9NWW7 574 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ZNF281Q9Y2X9 895 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM212A6NML5 194 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 OR5K4A6NMS3 321 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 EMC8O43402 210 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 MBTPS2O43462 519 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 HEXAP06865 529 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CXCL3P19876 107 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ITPKBP27987 946 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 HTR1FP30939 366 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ORAI1Q96D31 301 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 F2RL3Q96RI0 385 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 MCHR1Q99705 422 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 UBQLN4Q9NRR5 601 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 STARD10Q9Y365 291 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 TMEM202A6NGA9 273 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 NRG2O14511 850 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ANGPTL7O43827 346 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 PRAMEF4O60810 478 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 NDUFB2O95178 105 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CST4P01036 141 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CSTBP04080 98 aaKnown RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 ADRA2CP18825 462 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 CCNOP22674 350 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 GNRHRP30968 328 aa5.52□□□□□ -1.53
PTPRD-214ENST00000540109 RPS15AP62244 130 aaKnown RBP5.52□□□□□ -1.53
PTPRD-214ENST00000540109 RPS26P62854 115 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms