RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GALNT16Q8N428 558 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 GDPD1Q8N9F7 314 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 SLC25A38Q96DW6 304 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 MNTQ99583 582 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 DDX28Q9NUL7 540 aaKnown RBP12.5□□□□□ -0.41
ACTN1-205ENST00000538545 CGGBP1Q9UFW8 167 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-205ENST00000538545 OR5V1Q9UGF6 321 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 TEKT2Q9UIF3 430 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 SLC5A6Q9Y289 635 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 PRR14LQ5THK1 2151 aa12.5□□□□□ -0.41
ACTN1-205ENST00000538545 LOC107986453A0A1B0GWG9 222 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 GPR171O14626 319 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 CD1AP06126 327 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 NPR2P20594 1047 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 KIR2DL3P43628 341 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 PMP22Q01453 160 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 SPOCK1Q08629 439 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 RASGEF1BQ0VAM2 473 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 PCK2Q16822 640 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 DTX1Q86Y01 620 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ACOT12Q8WYK0 555 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 HPS1Q92902 700 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 SP140LQ9H930 580 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 R4GMQ9 66 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ANKRD11Q6UB99 2663 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-205ENST00000538545 DCDC2BA2VCK2 349 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 OR5H15A6NDH6 313 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ANXA2P2A6NMY6 339 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 CENPBD1B2RD01 187 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ANXA2P07355 339 aaKnown RBP12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ITGA5P08648 1049 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 CFL1P23528 166 aaKnown RBP12.49□□□□□ -0.41
ACTN1-205ENST00000538545 RBMS1P29558 406 aaKnown RBP12.49□□□□□ -0.41
ACTN1-205ENST00000538545 EFNB2P52799 333 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 HIST3H3Q16695 136 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 KRT74Q7RTS7 529 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ADPRHL1Q8NDY3 354 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 OR51D1Q8NGF3 324 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 TTTY12Q9BZ98 90 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 C1orf198Q9H425 327 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF703Q9H7S9 590 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-205ENST00000538545 ASCL3Q9NQ33 180 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 KLHL9Q9P2J3 617 aa12.49□□□□□ -0.41
ACTN1-205ENST00000538545 TRBV5-7A0A0A0MS05 114 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 AIPO00170 330 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 SLC19A2O60779 497 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 TALDO1P37837 337 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 GFRA1P56159 465 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-205ENST00000538545 AIMP2Q13155 320 aaKnown RBP12.48□□□□□ -0.41
ACTN1-205ENST00000538545 AGAP7PQ5VUJ5 663 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 GLRX5Q86SX6 157 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 DND1Q8IYX4 353 aaKnown RBP12.48□□□□□ -0.41
ACTN1-205ENST00000538545 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 TBCCD1Q9NVR7 557 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 DHDHQ9UQ10 334 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 PCDHGA9Q9Y5G4 932 aaKnown RBP12.48□□□□□ -0.41
ACTN1-205ENST00000538545 LIPGQ9Y5X9 500 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 A8MV72 311 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-205ENST00000538545 TNFRSF10AO00220 468 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 APOA1P02647 267 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 TTRP02766 147 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 DBHP09172 617 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF17P17021 662 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 PITPNBP48739 271 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 CCL11P51671 97 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 RAC3P60763 192 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 FAM205BPQ63HN1 556 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 TRILQ7L0X0 811 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 LINGO2Q7L985 606 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 TMEM251Q8N6I4 163 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 C19orf18Q8NEA5 215 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 LRFN3Q9BTN0 628 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 ZCCHC4Q9H5U6 513 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 NLKQ9UBE8 527 aa12.48□□□□□ -0.41
ACTN1-205ENST00000538545 TNRC6AQ8NDV7 1962 aaKnown RBP12.48□□□□□ -0.41
ACTN1-205ENST00000538545 AQP8O94778 261 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF432O94892 652 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 ACSM4P0C7M7 580 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 PLGLB1Q02325 96 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 BIVMQ86UB2 503 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 TMEM123Q8N131 208 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 ZNF454Q8N9F8 522 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 OR13C3Q8NGS6 347 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 OR2AJ1Q8NGZ0 328 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 ADGRG7Q96K78 797 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 THAP7Q9BT49 309 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-205ENST00000538545 DEFB127Q9H1M4 99 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 FAM206AQ9NX38 181 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 SPATA2Q9UM82 520 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 FLVCR1Q9Y5Y0 555 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 BSNQ9UPA5 3926 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 CDRT15L2A8MXV6 281 aa12.47□□□□□ -0.41
ACTN1-205ENST00000538545 CASRP41180 1078 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms