RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZDHHC23Q8IYP9 409 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 UPRTQ96BW1 309 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR5M11Q96RB7 305 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GDF15Q99988 308 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GPR87Q9BY21 358 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ESRP2Q9H6T0 727 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 ATG2BQ96BY7 2078 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 MYO7AQ13402 2215 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 LOC100289279A0A1B0GTE1 492 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR6C6A6NF89 314 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GABARAPH6UMI1 98 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 M0QYG6 137 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 LGALS8O00214 317 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 PHF1O43189 567 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 GABARAPO95166 117 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ERP29P30040 261 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 MRPS10P82664 201 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 GALEQ14376 348 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZNF169Q14929 603 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 SPCS2Q15005 226 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GSG1Q2KHT4 349 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ELFN2Q5R3F8 820 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 LYPD4Q6UWN0 246 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 NLRC3Q7RTR2 1065 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 BBS1Q8NFJ9 593 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 FAM3DQ96BQ1 224 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 EID2BQ96D98 161 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR5B12Q96R08 314 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 C1QTNF3Q9BXJ4 246 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 FN3KRPQ9HA64 309 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 KCNG2Q9UJ96 466 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 B3GALT5Q9Y2C3 310 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 POLDIP2Q9Y2S7 368 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 MYO16Q9Y6X6 1858 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 C7orf72A4D263 438 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 PAPLNO95428 1278 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SCG5P05408 212 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SERPINA7P05543 415 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZNF133P52736 654 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 SUMO3P55854 103 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 NKX6-1P78426 367 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 PRICKLE4Q2TBC4 344 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SSX9Q7RTT3 188 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ADGRE4PQ86SQ3 457 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 RDH10Q8IZV5 341 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZNF321PQ8N8H1 164 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 BEST4Q8NFU0 473 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR51D1Q8NGF3 324 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 STK35Q8TDR2 534 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SLAMF9Q96A28 289 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 FOXB1Q99853 325 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GDF2Q9UK05 429 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 GMEB1Q9Y692 573 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 PRRC2BQ5JSZ5 2229 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 MEIKINA0A087WXM9 373 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR5H15A6NDH6 313 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 XRCC2O43543 280 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 AGFG2O95081 481 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 CLDN1O95832 211 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ACHEP22303 614 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OMGP23515 440 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 MAGEA5P43359 124 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 HAAOP46952 286 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 BAXQ07812 192 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 RNPS1Q15287 305 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 SOWAHCQ53LP3 525 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 ACTBL2Q562R1 376 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR2B11Q5JQS5 317 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ACSM5Q6NUN0 579 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 JMJD6Q6NYC1 403 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZNF620Q6ZNG0 422 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SLC35G3Q8N808 338 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR51A2Q8NGJ7 313 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR10D3Q8NH80 312 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 M1APQ8TC57 530 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 RDH5Q92781 318 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 WDR90Q96KV7 1748 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OR2A5Q96R48 311 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 PPIL3Q9H2H8 161 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 KCNJ16Q9NPI9 418 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ASF1BQ9NVP2 202 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 TXNL4BQ9NX01 149 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 RAB22AQ9UL26 194 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 IGLV3-16A0A075B6K0 115 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 A0A1W2PPC1 479 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ALG1L2C9J202 215 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 UPK1BO75841 260 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 GPM6AP51674 278 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZNF121P58317 390 aaPredicted RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 RAB1AP62820 205 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SHBQ15464 509 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 BEX5Q5H9J7 111 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 DPPA2Q7Z7J5 298 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 NKAIN3Q8N8D7 197 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 PBOV1Q9GZY1 135 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 SLC25A31Q9H0C2 315 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 ZNF768Q9H5H4 540 aaKnown RBP4.85□□□□□ -1.63
LRP6-203ENST00000538239 CD300AQ9UGN4 299 aa4.85□□□□□ -1.63
LRP6-203ENST00000538239 OSGIN1Q9UJX0 560 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms