RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 NHLRC1Q6VVB1 395 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 H1FNTQ75WM6 255 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-210ENST00000538120 KCTD20Q7Z5Y7 419 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 SLC51BQ86UW2 128 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 CMTM4Q8IZR5 234 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 FADS6Q8N9I5 356 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 OR56B4Q8NH76 319 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 NTNG2Q96CW9 530 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 WBP1Q96G27 269 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 MRGPRX4Q96LA9 322 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 KLHL15Q96M94 604 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 SEC22CQ9BRL7 303 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 SDHAF3Q9NRP4 125 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 CA10Q9NS85 328 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 HPF1Q9NWY4 346 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 A0A1B0GTH9 108 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 A0A1B0GVI7 797 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 A0A1W2PPL8 197 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 TRIM77I1YAP6 450 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 M0R233 179 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 FLRT2O43155 660 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 GPRIN2O60269 458 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 SLC16A7O60669 478 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 RPP14O95059 124 aaKnown RBP9.6□□□□□ -0.87
CLIP1-210ENST00000538120 GOSR1O95249 250 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 ALDOBP05062 364 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 POU3F2P20265 443 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-210ENST00000538120 PTGS2P35354 604 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF41P51814 821 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-210ENST00000538120 MAP2K6P52564 334 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 CLDN12P56749 244 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 TSPAN5P62079 268 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 EXT1Q16394 746 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 SEZ6L2Q6UXD5 910 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 LRRC69Q6ZNQ3 347 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 LINGO2Q7L985 606 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 FGD2Q7Z6J4 655 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 OR5M1Q8NGP8 315 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 ASB10Q8WXI3 467 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 DDIT4LQ96D03 193 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 MNTQ99583 582 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 CMKLR1Q99788 373 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 ZPBPQ9BS86 351 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 RDH8Q9NYR8 311 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 PTTG3PQ9NZH4 202 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 FRRS1LQ9P0K9 344 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 KLK11Q9UBX7 282 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 KCNG2Q9UJ96 466 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF281Q9Y2X9 895 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 LOXL2Q9Y4K0 774 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 NPTNQ9Y639 398 aa9.6□□□□□ -0.87
CLIP1-210ENST00000538120 H3BML4 177 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 TEX46H3BTG2 121 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 TSPAN4O14817 238 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 TACSTD2P09758 323 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 CD59P13987 128 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 CXCL2P19875 107 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 CCR9P51686 369 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 ARHGDIBP52566 201 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 HES5Q5TA89 166 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 PRAMEF20Q5VT98 475 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 HACD4Q5VWC8 232 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 TIPARPQ7Z3E1 657 aaKnown RBP9.59□□□□□ -0.87
CLIP1-210ENST00000538120 OTOSQ8NHW6 89 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF671Q8TAW3 534 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 SMIM4Q8WVI0 70 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 RBPMSQ93062 196 aaKnown RBP9.59□□□□□ -0.87
CLIP1-210ENST00000538120 LOXL4Q96JB6 756 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 LINC00052Q96N35 136 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 GFI1Q99684 422 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 GSX2Q9BZM3 304 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 PROK2Q9HC23 129 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 HRASLSQ9HDD0 168 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 CHST11Q9NPF2 352 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 NOX4Q9NPH5 578 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 ANKRD10Q9NXR5 420 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 COPZ2Q9P299 210 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 CAMK2AQ9UQM7 478 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 MAB21L2Q9Y586 359 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 OR6C65A6NJZ3 312 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 ARPC1BO15143 372 aaKnown RBP9.59□□□□□ -0.87
CLIP1-210ENST00000538120 STK17BO94768 372 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 OPN1LWP04000 364 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 ACSM4P0C7M7 580 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 IFNGR1P15260 489 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 AVPR2P30518 371 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 FOLR3P41439 243 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 PITPNAQ00169 270 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 EGR3Q06889 387 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 ALKBH1Q13686 389 aaKnown RBP9.59□□□□□ -0.87
CLIP1-210ENST00000538120 GPAT4Q86UL3 456 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 OR52I2Q8NH67 350 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 THEM6Q8WUY1 208 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 SFXN2Q96NB2 322 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 SLC25A18Q9H1K4 315 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 ZNF160Q9HCG1 818 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 SH2D2AQ9NP31 389 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 SPATA2Q9UM82 520 aa9.59□□□□□ -0.87
CLIP1-210ENST00000538120 PCDHGA9Q9Y5G4 932 aaKnown RBP9.59□□□□□ -0.87
CLIP1-210ENST00000538120 PCDHGA5Q9Y5G8 931 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms