RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 A0A1W2PPL8 197 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 C5orf49A4QMS7 147 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 OR6C6A6NF89 314 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 AQP12BA6NM10 295 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 C17orf100A8MU93 164 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 TNFRSF11BO00300 401 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 SLC16A7O60669 478 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 VENTXO95231 258 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 CLPTM1O96005 669 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 FAM157BP0CG42 384 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 GAAP10253 952 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 TMEM33P57088 247 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 ACTR3P61158 418 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 FAM98BQ52LJ0 330 aaKnown RBP10.61□□□□□ -0.71
PRKDC-207ENST00000536483 ELFN2Q5R3F8 820 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 ZNF362Q5T0B9 420 aaPredicted RBP10.61□□□□□ -0.71
PRKDC-207ENST00000536483 ZNF774Q6NX45 483 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 DNM1P34Q6PK57 102 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 CD300LDQ6UXZ3 194 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 RASSF6Q6ZTQ3 369 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 AQP12AQ8IXF9 295 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 OR6V1Q8N148 313 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 FANK1Q8TC84 345 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 STMN2Q93045 179 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 ERMAPQ96PL5 475 aaPredicted RBP10.61□□□□□ -0.71
PRKDC-207ENST00000536483 SYT3Q9BQG1 590 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 ELOVL3Q9HB03 270 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 EIF3KQ9UBQ5 218 aaKnown RBP10.61□□□□□ -0.71
PRKDC-207ENST00000536483 CGGBP1Q9UFW8 167 aaPredicted RBP10.61□□□□□ -0.71
PRKDC-207ENST00000536483 IL20RAQ9UHF4 553 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 DUSP13Q9UII6 198 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 B9D1Q9UPM9 204 aa10.61□□□□□ -0.71
PRKDC-207ENST00000536483 COA3Q9Y2R0 106 aaPredicted RBP10.61□□□□□ -0.71
PRKDC-207ENST00000536483 ARRDC5A6NEK1 342 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 B4DSR2 109 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 DCTN6O00399 190 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 BHLHE40O14503 412 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 SOCS2O14508 198 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 GASTP01350 101 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 LCKP06239 509 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 RAP2AP10114 183 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 HIST1H1CP16403 213 aaKnown RBP10.6□□□□□ -0.71
PRKDC-207ENST00000536483 PCMT1P22061 227 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 ACHEP22303 614 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 COL8A2P25067 703 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 LIPAP38571 399 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 ALDH3B1P43353 468 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 MMP15P51511 669 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 ERVS71-1P61550 626 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 MICAQ29983 383 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 KRTAP27-1Q3LI81 207 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 ZNF718Q3SXZ3 478 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 FAM209AQ5JX71 171 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 OR2T5Q6IEZ7 315 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 ARL9Q6T311 187 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 VASH1Q7L8A9 365 aaPredicted RBP10.6□□□□□ -0.71
PRKDC-207ENST00000536483 GLCCI1Q86VQ1 547 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 LNX2Q8N448 690 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 NPEPL1Q8NDH3 523 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 OR1J1Q8NGS3 322 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 OR2T29Q8NH02 315 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 RDH5Q92781 318 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 C4orf45Q96LM5 186 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 SAMD8Q96LT4 415 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 DCLRE1CQ96SD1 692 aaKnown RBP10.6□□□□□ -0.71
PRKDC-207ENST00000536483 THTPAQ9BU02 230 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 NARFLQ9H6Q4 476 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 METTL17Q9H7H0 456 aaPredicted RBP10.6□□□□□ -0.71
PRKDC-207ENST00000536483 LPAR2Q9HBW0 351 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 EMC7Q9NPA0 242 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 HINT3Q9NQE9 182 aaKnown RBP10.6□□□□□ -0.71
PRKDC-207ENST00000536483 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 CDH10Q9Y6N8 788 aa10.6□□□□□ -0.71
PRKDC-207ENST00000536483 OR6C68A6NDL8 312 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 FAM157AC9JC47 383 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 SGCEO43556 437 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 RP2O75695 350 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 CCNB2O95067 398 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 PPP1R3DO95685 299 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 NGFP01138 241 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 HPXP02790 462 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 GSTM3P21266 225 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 CFPP27918 469 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 GPR6P46095 362 aaPredicted RBP10.59□□□□□ -0.71
PRKDC-207ENST00000536483 COX10Q12887 443 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 MAD2L1BPQ15013 274 aaPredicted RBP10.59□□□□□ -0.71
PRKDC-207ENST00000536483 CCDC92Q53HC0 331 aaPredicted RBP10.59□□□□□ -0.71
PRKDC-207ENST00000536483 TMEM255AQ5JRV8 349 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 ADGRG5Q8IZF4 528 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 GJC3Q8NFK1 279 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 SLC26A10Q8NG04 563 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 CLDND2Q8NHS1 167 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 KLF14Q8TD94 323 aaPredicted RBP10.59□□□□□ -0.71
PRKDC-207ENST00000536483 COG8Q96MW5 612 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 NMNAT3Q96T66 252 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 IFT27Q9BW83 186 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 PLA2G12AQ9BZM1 189 aa10.59□□□□□ -0.71
PRKDC-207ENST00000536483 CYSLTR2Q9NS75 346 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms