RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 CNTNAP3BQ96NU0 1288 aa20.11■□□□□ 0.81
RBFOX1-206ENST00000535565 SFXN3Q9BWM7 321 aa20.11■□□□□ 0.81
RBFOX1-206ENST00000535565 CNTNAP3Q9BZ76 1288 aa20.11■□□□□ 0.81
RBFOX1-206ENST00000535565 NIPAL2Q9H841 368 aa20.11■□□□□ 0.81
RBFOX1-206ENST00000535565 SIRT4Q9Y6E7 314 aaPredicted RBP20.11■□□□□ 0.81
RBFOX1-206ENST00000535565 INTS1Q8N201 2190 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 H3BMQ9 156 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 ITGA5P08648 1049 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 NR4A1P22736 598 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 CTSSP25774 331 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 HSD11B1P28845 292 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 FOXG1P55316 489 aaPredicted RBP20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 GRB2P62993 217 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 SLC3A1Q07837 685 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 NFATC3Q12968 1075 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 TRAM1Q15629 374 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 SLC36A2Q495M3 483 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 ANKRD16Q6P6B7 361 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 SKA3Q8IX90 412 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 NAXEQ8NCW5 288 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 C12orf43Q96C57 262 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 TMED9Q9BVK6 235 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 OR51E2Q9H255 320 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 SH3BGRL2Q9UJC5 107 aa20.1■□□□□ 0.81
RBFOX1-206ENST00000535565 SPTA1P02549 2419 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 LOC100506127A0A0U1RQW1 187 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 CD1AP06126 327 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 DCTDP32321 178 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 GDI2P50395 445 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 RPS25P62851 125 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 ALKBH1Q13686 389 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 CTF1Q16619 201 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 ZNF829Q3KNS6 432 aaPredicted RBP20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 FDX2Q6P4F2 183 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 GDPGP1Q6ZNW5 385 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 OR1K1Q8NGR3 316 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 TMEM203Q969S6 136 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 CHCHD6Q9BRQ6 235 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 PNRC2Q9NPJ4 139 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 DDX28Q9NUL7 540 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 PLEK2Q9NYT0 353 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 SSR3Q9UNL2 185 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 SF3B6Q9Y3B4 125 aaKnown RBP20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 TIMM10BQ9Y5J6 103 aa20.09■□□□□ 0.81
RBFOX1-206ENST00000535565 A0A096LPE4 126 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 A0A1W2PPZ6 126 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 SGCEO43556 437 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 IL18BPO95998 194 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 CD8BP10966 210 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 PMPCAQ10713 525 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 RAB35Q15286 201 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 ELFN2Q5R3F8 820 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 ATF6BQ99941 703 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 HDHD2Q9H0R4 259 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 EXOSC4Q9NPD3 245 aaKnown RBP20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 SLC5A6Q9Y289 635 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 R4GMQ9 66 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 SHANK1Q9Y566 2161 aa20.08■□□□□ 0.81
RBFOX1-206ENST00000535565 GPRIN2O60269 458 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 CGAP01215 116 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 HLA-DPB1P04440 258 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 ZNF32P17041 273 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 OPRM1P35372 400 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 NANOS3P60323 173 aaKnown RBP20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 LSM3P62310 102 aaKnown RBP20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 CCDC92Q53HC0 331 aaPredicted RBP20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 BEND4Q6ZU67 534 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 DPPA2Q7Z7J5 298 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 MS4A15Q8N5U1 240 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 OR2G2Q8NGZ5 317 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 RPS4Y2Q8TD47 263 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 HSD17B8Q92506 261 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 GHSRQ92847 366 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 RPL3LQ92901 407 aaKnown RBP20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 PGLYRP3Q96LB9 341 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 GALNT8Q9NY28 637 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 FBXL3Q9UKT7 428 aa20.08■□□□□ 0.8
RBFOX1-206ENST00000535565 ATRXP46100 2492 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 SLC22A1O15245 554 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 DOK2O60496 412 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 IGHV1-2P23083 117 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 CRYBB2P43320 205 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 NANOS1Q8WY41 292 aaKnown RBP20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 RNF166Q96A37 237 aaPredicted RBP20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 COQ7Q99807 217 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 COMMD4Q9H0A8 199 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 OPN3Q9H1Y3 402 aaPredicted RBP20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 RNF121Q9H920 327 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 FRRS1LQ9P0K9 344 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 GTF2A1LQ9UNN4 478 aa20.07■□□□□ 0.8
RBFOX1-206ENST00000535565 TMEM269A0A1B0GVZ9 245 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 CIB4A0PJX0 185 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 LOC110117498-PIK3R3F6TDL0 507 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 LRRTM2O43300 516 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 GPX5O75715 221 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 GALP22466 123 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 CCR9P51686 369 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 ECH1Q13011 328 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 TMEM211Q6ICI0 200 aa20.06■□□□□ 0.8
RBFOX1-206ENST00000535565 ZNF610Q8N9Z0 462 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms