RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MRPS34P82930 218 aaKnown RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 TXNL4AP83876 142 aaKnown RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 KLRD1Q13241 179 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 DCTN2Q13561 401 aaKnown RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SGCAQ16586 387 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 CCDC153Q494R4 210 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 PDCD4Q53EL6 469 aaKnown RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 CEP85LQ5SZL2 805 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SFRP4Q6FHJ7 346 aaPredicted RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ULK3Q6PHR2 472 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 METAP1DQ6UB28 335 aaPredicted RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ADAMTSL5Q6ZMM2 481 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ZNF621Q6ZSS3 439 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 IGFN1Q86VF2 1251 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 NUDCD3Q8IVD9 361 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 C1orf87Q8N0U7 546 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SDR9C7Q8NEX9 313 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 RORBQ92753 470 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SLC35B4Q969S0 331 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 RBMXL1Q96E39 390 aaKnown RBP6.74□□□□□ -1.33
CLIP1-206ENST00000535290 CCDC115Q96NT0 180 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 OR5M11Q96RB7 305 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 SSX3Q99909 188 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 CHID1Q9BWS9 393 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 NPFFR1Q9GZQ6 430 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ARMC7Q9H6L4 198 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ZNF702PQ9H963 129 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 MEAF6Q9HAF1 191 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 PALMDQ9NP74 551 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 C20orf141Q9NUB4 165 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 TBCCD1Q9NVR7 557 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 ASIC5Q9NY37 505 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 P2RX2Q9UBL9 471 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 TBK1Q9UHD2 729 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 KPTNQ9Y664 436 aa6.74□□□□□ -1.33
CLIP1-206ENST00000535290 MEIOCA2RUB1 952 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 MLNRO43193 412 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 ADAM20O43506 726 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 TRIM13O60858 407 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 DUS4LO95620 317 aaKnown RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 PF4P02776 101 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 CCDC159P0C7I6 412 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 EEF1B2P24534 225 aaKnown RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 PAX6P26367 422 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 LAP3P28838 519 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 GSTT1P30711 240 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 ZNF133P52736 654 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 CD83Q01151 205 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 PCLAFQ15004 111 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 CLEC12AQ5QGZ9 265 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 C10orf128Q5T292 105 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 FAM27BQ5VT28 67 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 FAM91A1Q658Y4 838 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 OR2T2Q6IF00 324 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 C10orf111Q8N326 155 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 FGFRL1Q8N441 504 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 NPEPL1Q8NDH3 523 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 BEND2Q8NDZ0 799 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 NOXO1Q8NFA2 376 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 OR8G5Q8NG78 346 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 OR13G1Q8NGZ3 307 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 NSMAFQ92636 917 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 TESCQ96BS2 214 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 NMD3Q96D46 503 aaKnown RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 TMEM19Q96HH6 336 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 MAELQ96JY0 434 aaKnown RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 PANX1Q96RD7 426 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 DDOQ99489 341 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 SEPHS2Q99611 448 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 NKX3-1Q99801 234 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 WNT10AQ9GZT5 417 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 CALML5Q9NZT1 146 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 BTNL2Q9UIR0 455 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 TMA7Q9Y2S6 64 aaKnown RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 IFT52Q9Y366 437 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 TIMM10BQ9Y5J6 103 aa6.73□□□□□ -1.33
CLIP1-206ENST00000535290 HUWE1Q7Z6Z7 4374 aaKnown RBP6.73□□□□□ -1.33
CLIP1-206ENST00000535290 A0A0B4J2E0 115 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 A0A0G2JPF8 293 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 A0A1B0GX12 115 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 ELOVL7A1L3X0 281 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 HNRNPCL2B2RXH8 293 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 HNRNPCL3B7ZW38 293 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 DVL1O14640 695 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 HDAC3O15379 428 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 HNRNPCL1O60812 293 aaKnown RBP6.72□□□□□ -1.33
CLIP1-206ENST00000535290 FAM20BO75063 409 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 TRMUO75648 421 aaKnown RBP6.72□□□□□ -1.33
CLIP1-206ENST00000535290 CH25HO95992 272 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 MT-ATP6P00846 226 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 HLA-DPB1P04440 258 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 HNRNPCL4P0DMR1 293 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 IRF2P14316 349 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 FAHP16930 419 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 TUBG1P23258 451 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 S100A3P33764 101 aa6.72□□□□□ -1.33
CLIP1-206ENST00000535290 GATA4P43694 442 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms